Difference between revisions of "7KAPSYN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPONTPRO-RXN SPONTPRO-RXN] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * Wi...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-6231 TAX-62...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPONTPRO-RXN SPONTPRO-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384] ==
−
* direction:
+
* taxonomic range:
−
** REVERSIBLE
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-6231 TAX-6231]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-6157 TAX-6157]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-6340 TAX-6340]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-6447 TAX-6447]
 +
* common name:
 +
** anaerobic energy metabolism (invertebrates, mitochondrial)
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''6''' reactions found over '''12''' reactions in the full pathway
−
** 1 [[WATER]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
+
* [[1.1.1.39-RXN]]
−
* With common name(s):
+
** 3 associated gene(s):
−
** 1 H2O[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c] '''+''' 1 H+[c] '''<=>''' 1 L-glutamate-5-semialdehyde[c]
+
*** [[Ec-01_003680]]
−
 
+
*** [[Ec-07_002070]]
−
== Genes associated with this reaction  ==
+
*** [[Ec-07_002060]]
−
== Pathways  ==
+
** 1 reconstruction source(s) associated:
−
* [[PWY-6922]], L-N&delta;-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
+
*** [[annotation-esiliculosus_genome]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
* [[FUMHYDR-RXN]]
−
* [[PWY-6853]], ethylene biosynthesis II (microbes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6853 PWY-6853]
+
** 2 associated gene(s):
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
*** [[Ec-25_001360]]
−
* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
+
*** [[Ec-23_003460]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** 2 reconstruction source(s) associated:
−
* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
+
*** [[annotation-esiliculosus_genome]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
*** [[orthology-aragem]]
−
* [[PROUT-PWY]], L-proline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY]
+
* [[PROPIONYL-COA-CARBOXY-RXN]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** 1 associated gene(s):
−
* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
+
*** [[Ec-01_010970]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** 1 reconstruction source(s) associated:
−
* [[PWY-7770]], indolmycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7770 PWY-7770]
+
*** [[annotation-esiliculosus_genome]]
−
** '''1''' reactions found over '''10''' reactions in the full pathway
+
* [[PWY-5537]]
−
* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
+
** 0 associated gene:
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
* [[PYRUVDEH-RXN]]
−
* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
+
** 8 associated gene(s):
−
** '''3''' reactions found over '''9''' reactions in the full pathway
+
*** [[Ec-27_004160]]
−
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
+
*** [[Ec-25_000140]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
*** [[Ec-25_000020]]
−
== Reconstruction information  ==
+
*** [[Ec-01_010530]]
−
* Category: [[annotation]]
+
*** [[Ec-23_002710]]
−
** Source: [[annotation-esiliculosus_genome]]
+
*** [[Ec-27_000530]]
−
*** Tool: [[pathwaytools]]
+
*** [[Ec-18_000080]]
 +
*** [[Ec-18_003420]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-aragem]]
 +
* [[SUCCCOASYN-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Ec-10_000030]]
 +
*** [[Ec-02_001020]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-EPIM-RXN METHYLMALONYL-COA-EPIM-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-MUT-RXN METHYLMALONYL-COA-MUT-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14963 RXN-14963]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8807 RXN-8807]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-268 RXN0-268]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-6231}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28234 28234]
+
{{#set: taxonomic range=TAX-6157}}
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-6340}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03314 R03314]
+
{{#set: taxonomic range=TAX-6447}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=anaerobic energy metabolism (invertebrates, mitochondrial)}}
−
{{#set: in pathway=PWY-6922|PWY-6853|PROSYN-PWY|PWY-3341|PROUT-PWY|ARG-PRO-PWY|PWY-7770|PWY-4981|PWY-6344|CITRULBIO-PWY}}
+
{{#set: reaction found=6}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: total reaction=12}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: completion rate=50.0}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 14:12, 21 March 2018

Pathway PWY-7384

Reaction(s) found

6 reactions found over 12 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=7KAPSYN-RXN&oldid=16584"