Difference between revisions of "ARGDEG-V-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3422 RXN-3422] == * direction: ** LEFT-TO-RIGHT * common name: ** Protein of unknown function D...")
(Created page with "Category:Gene == Gene Ec-19_003040 == * left end position: ** 3312583 * transcription direction: ** NEGATIVE * right end position: ** 3324940 * centisome position: ** 55.4...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3422 RXN-3422] ==
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== Gene Ec-19_003040 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3312583
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* common name:
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* transcription direction:
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** Protein of unknown function DUF858, methyltransferase-like
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.1.1.68 EC-2.1.1.68]
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** 3324940
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* centisome position:
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** 55.48076   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0592_0001
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** Esi0592_0001
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** ACC
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[5-HYDROXY-FERULIC-ACID]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SINAPATE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 5-hydroxyferulate[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 sinapate[c]
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* Reaction: [[RXN0-5055]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-01_004720]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-2181]], free phenylpropanoid acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2181 PWY-2181]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY0-1264]]
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* [[PWY-7388]]
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* [[PWY-5789]]
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* [[PWY-5743]]
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* [[PWY-5744]]
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* [[PWY-6722]]
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* [[PWY-6679]]
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* [[PWY-4381]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=3312583}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02379 R02379]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3324940}}
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{{#set: common name=Protein of unknown function DUF858, methyltransferase-like}}
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{{#set: centisome position=55.48076    }}
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{{#set: ec number=EC-2.1.1.68}}
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{{#set: common name=Esi_0592_0001|Esi0592_0001|ACC}}
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{{#set: gene associated=Ec-01_004720}}
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{{#set: reaction associated=ACETYL-COA-CARBOXYLTRANSFER-RXN|RXN0-5055}}
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{{#set: in pathway=PWY-2181}}
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{{#set: pathway associated=PWY0-1264|PWY-7388|PWY-5789|PWY-5743|PWY-5744|PWY-6722|PWY-6679|PWY-4381}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:28, 21 March 2018

Gene Ec-19_003040

  • left end position:
    • 3312583
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3324940
  • centisome position:
    • 55.48076
  • Synonym(s):
    • Esi_0592_0001
    • Esi0592_0001
    • ACC

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=ARGDEG-V-PWY&oldid=18859"