Difference between revisions of "BRANCHED-CHAINAMINOTRANSFERILEU-RXN"

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(Created page with "Category:Gene == Gene Ec-11_002590 == * left end position: ** 2711246 * transcription direction: ** NEGATIVE * right end position: ** 2715132 * centisome position: ** 43.1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERILEU-RXN BRANCHED-CHAINAMINOTRANSFERILEU-RXN] == * direction: ** REVERSI...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-11_002590 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERILEU-RXN BRANCHED-CHAINAMINOTRANSFERILEU-RXN] ==
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* left end position:
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* direction:
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** 2711246
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** REVERSIBLE
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* transcription direction:
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* common name:
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** NEGATIVE
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** branched-chain-amino-acid transaminase
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* right end position:
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* ec number:
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** 2715132
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** [http://enzyme.expasy.org/EC/2.6.1.42 EC-2.6.1.42]
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* centisome position:
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** 43.106415   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0048_0023
 
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** Esi0048_0023
 
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** GST
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[DISULFOXRED-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[ILE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[2-KETO-3-METHYL-VALERATE]][c]
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***go-term
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* With common name(s):
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* [[GSHTRAN-RXN]]
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** 1 2-oxoglutarate[c] '''+''' 1 L-isoleucine[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 (S)-3-methyl-2-oxopentanoate[c]
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** esiliculosus_genome
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***ec-number
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== Genes associated with this reaction  ==
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* [[GST-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** esiliculosus_genome
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* Gene: [[Ec-20_001390]]
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***ec-number
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-13673]]
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*** Assignment: GO-TERM
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** esiliculosus_genome
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* Gene: [[Ec-12_005520]]
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***ec-number
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-15680]]
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*** Assignment: GO-TERM
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** esiliculosus_genome
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** Source: [[orthology-aragem]]
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***ec-number
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* Gene: [[Ec-12_005560]]
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== Pathways associated ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-7112]]
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*** Assignment: GO-TERM
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* [[PWY-6842]]
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* Gene: [[Ec-01_007170]]
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* [[PWY-4061]]
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** Source: [[orthology-aragem]]
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* [[PWY-7533]]
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* Gene: [[Ec-12_005530]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways ==
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* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5108]], L-isoleucine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5108 PWY-5108]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5078]], L-isoleucine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5078 PWY-5078]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=2711246}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24801 24801]
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{{#set: right end position=2715132}}
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* LIGAND-RXN:
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{{#set: centisome position=43.106415    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02199 R02199]
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{{#set: common name=Esi_0048_0023|Esi0048_0023|GST}}
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* UNIPROT:
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{{#set: reaction associated=DISULFOXRED-RXN|GSHTRAN-RXN|GST-RXN|RXN-13673|RXN-15680}}
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** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
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{{#set: pathway associated=PWY-7112|PWY-6842|PWY-4061|PWY-7533}}
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** [http://www.uniprot.org/uniprot/P38891 P38891]
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** [http://www.uniprot.org/uniprot/P47176 P47176]
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** [http://www.uniprot.org/uniprot/O86505 O86505]
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** [http://www.uniprot.org/uniprot/O14370 O14370]
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** [http://www.uniprot.org/uniprot/O32954 O32954]
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** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=branched-chain-amino-acid transaminase}}
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{{#set: ec number=EC-2.6.1.42}}
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{{#set: gene associated=Ec-20_001390|Ec-12_005520|Ec-12_005560|Ec-01_007170|Ec-12_005530}}
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{{#set: in pathway=ILEUSYN-PWY|ILEUDEG-PWY|PWY-5108|PWY-5103|PWY-5101|PWY-5078|PWY-5104}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:40, 21 March 2018

Reaction BRANCHED-CHAINAMINOTRANSFERILEU-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • branched-chain-amino-acid transaminase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine): ILEUSYN-PWY
    • 7 reactions found over 7 reactions in the full pathway
  • ILEUDEG-PWY, L-isoleucine degradation I: ILEUDEG-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-5108, L-isoleucine biosynthesis V: PWY-5108
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5103, L-isoleucine biosynthesis III: PWY-5103
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5101, L-isoleucine biosynthesis II: PWY-5101
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-5078, L-isoleucine degradation II: PWY-5078
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5104, L-isoleucine biosynthesis IV: PWY-5104
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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