Difference between revisions of "Biomass rxn"

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(Created page with "Category:Gene == Gene Ec-01_004980 == * left end position: ** 4280060 * transcription direction: ** NEGATIVE * right end position: ** 4287063 * centisome position: ** 41.4...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-01_004980 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] ==
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* left end position:
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* direction:
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** 4280060
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** NAD(P)H-Nitrate reductase
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* right end position:
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* ec number:
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** 4287063
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** [http://enzyme.expasy.org/EC/1.7.1.1 EC-1.7.1.1]
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* centisome position:
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** 41.478138   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0018_0114
 
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** Esi0018_0114
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[DIHYDROFOLATESYNTH-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[PROTON]][c] '''+''' 1 [[NITRATE]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NITRITE]][c]
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***automated-name-match
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* With common name(s):
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* [[FOLYLPOLYGLUTAMATESYNTH-RXN]]
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** 1 H+[c] '''+''' 1 nitrate[c] '''+''' 1 NADH[c] '''=>''' 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 nitrite[c]
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** esiliculosus_genome
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***go-term
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== Genes associated with this reaction  ==
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* [[FORMYLTHFGLUSYNTH-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** esiliculosus_genome
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* [[Ec-10_005740]]
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***go-term
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** ESILICULOSUS_GENOME
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* [[RXN0-2921]]
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***EC-NUMBER
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** esiliculosus_genome
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== Pathways  ==
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***go-term
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* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
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== Pathways associated ==
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-2161]]
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== Reconstruction information  ==
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* [[PWY-6614]]
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* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=4280060}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17913 17913]
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{{#set: right end position=4287063}}
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* LIGAND-RXN:
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{{#set: centisome position=41.478138    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00794 R00794]
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{{#set: common name=Esi_0018_0114|Esi0018_0114}}
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* UNIPROT:
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{{#set: reaction associated=DIHYDROFOLATESYNTH-RXN|FOLYLPOLYGLUTAMATESYNTH-RXN|FORMYLTHFGLUSYNTH-RXN|RXN0-2921}}
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** [http://www.uniprot.org/uniprot/Q39607 Q39607]
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{{#set: pathway associated=PWY-2161|PWY-6614}}
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** [http://www.uniprot.org/uniprot/Q41201 Q41201]
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** [http://www.uniprot.org/uniprot/P17569 P17569]
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** [http://www.uniprot.org/uniprot/P54233 P54233]
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** [http://www.uniprot.org/uniprot/P36841 P36841]
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** [http://www.uniprot.org/uniprot/P27967 P27967]
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** [http://www.uniprot.org/uniprot/P27969 P27969]
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** [http://www.uniprot.org/uniprot/P11035 P11035]
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** [http://www.uniprot.org/uniprot/P08509 P08509]
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** [http://www.uniprot.org/uniprot/P11605 P11605]
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** [http://www.uniprot.org/uniprot/P23312 P23312]
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** [http://www.uniprot.org/uniprot/P17570 P17570]
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** [http://www.uniprot.org/uniprot/P16081 P16081]
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** [http://www.uniprot.org/uniprot/Q01170 Q01170]
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** [http://www.uniprot.org/uniprot/P39865 P39865]
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** [http://www.uniprot.org/uniprot/P11832 P11832]
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** [http://www.uniprot.org/uniprot/P39869 P39869]
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** [http://www.uniprot.org/uniprot/Q43265 Q43265]
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** [http://www.uniprot.org/uniprot/P43101 P43101]
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** [http://www.uniprot.org/uniprot/P43100 P43100]
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** [http://www.uniprot.org/uniprot/Q42497 Q42497]
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** [http://www.uniprot.org/uniprot/P39866 P39866]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=NAD(P)H-Nitrate reductase}}
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{{#set: ec number=EC-1.7.1.1}}
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{{#set: gene associated=Ec-10_005740}}
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{{#set: in pathway=PWY-381}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 21:43, 17 March 2018

Reaction NITRATE-REDUCTASE-NADH-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NAD(P)H-Nitrate reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 nitrate[c] + 1 NADH[c] => 1 NAD+[c] + 1 H2O[c] + 1 nitrite[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-381, nitrate reduction II (assimilatory): PWY-381
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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