Difference between revisions of "Biomass rxn"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=biomass_rxn biomass_rxn] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * W...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=biomass_rxn biomass_rxn] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
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* common name:
 
−
** NAD(P)H-Nitrate reductase
 
−
* ec number:
 
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** [http://enzyme.expasy.org/EC/1.7.1.1 EC-1.7.1.1]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[NITRATE]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NITRITE]][c]
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** 0.029 [[GLYCOLLATE]][c] '''+''' 0.35 [[PHE]][c] '''+''' 0.65 [[THR]][c] '''+''' 18.85 [[GLT]][c] '''+''' 3.8 [[GLY]][c] '''+''' 26.6 [[L-ALPHA-ALANINE]][c] '''+''' 0.1 [[L-ORNITHINE]][c] '''+''' 2.375 [[GLYCEROL]][c] '''+''' 19.3055 [[CIT]][c] '''+''' 2.7615 [[GLC]][c] '''+''' 0.2 [[ILE]][c] '''+''' 0.85 [[VAL]][c] '''+''' 12.5 [[L-ASPARTATE]][c] '''+''' 0.35 [[LYS]][c] '''+''' 331.4 [[MANNITOL]][c] '''+''' 1.35 [[PRO]][c] '''+''' 0.878 [[SUC]][c] '''+''' 0.1 [[ARG]][c] '''+''' 0.3 [[MET]][c] '''+''' 0.75 [[ASN]][c] '''+''' 10.7 [[GLN]][c] '''+''' 9.37 [[THREO-DS-ISO-CITRATE]][c] '''+''' 0.1 [[HIS]][c] '''+''' 0.115 [[TRP]][c] '''+''' 0.125 [[TYR]][c] '''+''' 0.3 [[LEU]][c] '''+''' 0.01 [[4-AMINO-BUTYRATE]][c] '''+''' 0.3 [[CYS]][c] '''+''' 0.123 [[GLYCERATE]][c] '''+''' 3.35 [[SER]][c] '''=>''' 1 [[BIOMASS]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 nitrate[c] '''+''' 1 NADH[c] '''=>''' 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 nitrite[c]
+
**
−
 
+
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-10_005740]]
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* Gene: [[None]]
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** ESILICULOSUS_GENOME
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** Source: [[manual-2_biomass_rxn]]
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***EC-NUMBER
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== Pathways  ==
 
== Pathways  ==
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* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[manual]]
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** Source: [[annotation-esiliculosus_genome]]
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** Source: [[manual-2_biomass_rxn]]
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*** Tool: [[pathwaytools]]
+
*** Comment: [[forfba]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17913 17913]
 
−
* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00794 R00794]
 
−
* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q39607 Q39607]
 
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** [http://www.uniprot.org/uniprot/Q41201 Q41201]
 
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** [http://www.uniprot.org/uniprot/P17569 P17569]
 
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** [http://www.uniprot.org/uniprot/P54233 P54233]
 
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** [http://www.uniprot.org/uniprot/P36841 P36841]
 
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** [http://www.uniprot.org/uniprot/P27967 P27967]
 
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** [http://www.uniprot.org/uniprot/P27969 P27969]
 
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** [http://www.uniprot.org/uniprot/P11035 P11035]
 
−
** [http://www.uniprot.org/uniprot/P08509 P08509]
 
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** [http://www.uniprot.org/uniprot/P11605 P11605]
 
−
** [http://www.uniprot.org/uniprot/P23312 P23312]
 
−
** [http://www.uniprot.org/uniprot/P17570 P17570]
 
−
** [http://www.uniprot.org/uniprot/P16081 P16081]
 
−
** [http://www.uniprot.org/uniprot/Q01170 Q01170]
 
−
** [http://www.uniprot.org/uniprot/P39865 P39865]
 
−
** [http://www.uniprot.org/uniprot/P11832 P11832]
 
−
** [http://www.uniprot.org/uniprot/P39869 P39869]
 
−
** [http://www.uniprot.org/uniprot/Q43265 Q43265]
 
−
** [http://www.uniprot.org/uniprot/P43101 P43101]
 
−
** [http://www.uniprot.org/uniprot/P43100 P43100]
 
−
** [http://www.uniprot.org/uniprot/Q42497 Q42497]
 
−
** [http://www.uniprot.org/uniprot/P39866 P39866]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=NAD(P)H-Nitrate reductase}}
+
{{#set: gene associated=None}}
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{{#set: ec number=EC-1.7.1.1}}
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{{#set: in pathway=}}
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{{#set: gene associated=Ec-10_005740}}
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{{#set: reconstruction category=manual}}
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{{#set: in pathway=PWY-381}}
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{{#set: reconstruction source=manual-2_biomass_rxn}}
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{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction comment=forfba}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:10, 21 March 2018

Reaction biomass_rxn

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Biomass_rxn&oldid=25087"