Difference between revisions of "COBALSYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10658 RXN-10658] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-[acyl-carrier-pro...")
 
(Created page with "Category:Gene == Gene Ec-22_000080 == * left end position: ** 101833 * transcription direction: ** NEGATIVE * right end position: ** 111058 * centisome position: ** 2.2550...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10658 RXN-10658] ==
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== Gene Ec-22_000080 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 101833
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* common name:
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* transcription direction:
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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** NEGATIVE
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** Beta-ketoacyl synthase, N-terminal
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* right end position:
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** beta-ketoacyl synthase, partial
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** 111058
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** Thiolase-like, subgroup
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* centisome position:
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* ec number:
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** 2.2550125   
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0162_0001
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** Esi0162_0001
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** TRE
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[TREHALA-RXN]]
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** 1 [[Cis-Delta7-tetradecenoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[3-oxo-cis-D9-hexadecenoyl-ACPs]][c]
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** esiliculosus_genome
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* With common name(s):
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***ec-number
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** 1 a cis-Δ7-tetradecenoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a 3-oxo-cis-Δ9-hexadecenoyl-[acp][c]
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== Pathways associated ==
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* [[PWY0-1182]]
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== Genes associated with this reaction  ==
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* [[PWY0-1466]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-27_002090]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-27_003480]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-12_000650]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-12_000640]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways ==
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* [[PWY-6282]], palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6282 PWY-6282]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=101833}}
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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{{#set: right end position=111058}}
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{{#set: common name=beta-ketoacyl synthase, partial}}
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{{#set: centisome position=2.2550125    }}
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{{#set: common name=Thiolase-like, subgroup}}
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{{#set: common name=Esi_0162_0001|Esi0162_0001|TRE}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: reaction associated=TREHALA-RXN}}
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{{#set: gene associated=Ec-27_002090|Ec-27_003480|Ec-12_000650|Ec-12_000640}}
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{{#set: pathway associated=PWY0-1182|PWY0-1466}}
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{{#set: in pathway=PWY-6282}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 22:18, 17 March 2018

Gene Ec-22_000080

  • left end position:
    • 101833
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 111058
  • centisome position:
    • 2.2550125
  • Synonym(s):
    • Esi_0162_0001
    • Esi0162_0001
    • TRE

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=COBALSYN-PWY&oldid=12449"