Difference between revisions of "COBALSYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10658 RXN-10658] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-[acyl-carrier-pro...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=COBALSYN-PWY COBALSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-122...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10658 RXN-10658] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=COBALSYN-PWY COBALSYN-PWY] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
 
* common name:
 
* common name:
** 3-oxoacyl-[acyl-carrier-protein] synthase
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** adenosylcobalamin salvage from cobinamide I
** Beta-ketoacyl synthase, N-terminal
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** beta-ketoacyl synthase, partial
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** Thiolase-like, subgroup
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
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** vitamin B12 biosynthesis
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''1''' reactions found over '''6''' reactions in the full pathway
** 1 [[Cis-Delta7-tetradecenoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[3-oxo-cis-D9-hexadecenoyl-ACPs]][c]
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* [[BTUR2-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 a cis-Δ7-tetradecenoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a 3-oxo-cis-Δ9-hexadecenoyl-[acp][c]
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*** [[Ec-06_010830]]
 
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** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
* [[Ec-27_002090]]
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* [http://metacyc.org/META/NEW-IMAGE?object=COBALAMIN5PSYN-RXN COBALAMIN5PSYN-RXN]
** ESILICULOSUS_GENOME
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* [http://metacyc.org/META/NEW-IMAGE?object=COBINAMIDEKIN-RXN COBINAMIDEKIN-RXN]
***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=COBINPGUANYLYLTRANS-RXN COBINPGUANYLYLTRANS-RXN]
* [[Ec-27_003480]]
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* [http://metacyc.org/META/NEW-IMAGE?object=DMBPPRIBOSYLTRANS-RXN DMBPPRIBOSYLTRANS-RXN]
** ESILICULOSUS_GENOME
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8770 RXN-8770]
***EC-NUMBER
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* [[Ec-12_000650]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-12_000640]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6282]], palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6282 PWY-6282]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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* ECOCYC:
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=COBALSYN-PWY COBALSYN-PWY]
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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{{#set: taxonomic range=TAX-1224}}
{{#set: common name=beta-ketoacyl synthase, partial}}
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{{#set: common name=adenosylcobalamin salvage from cobinamide I}}
{{#set: common name=Thiolase-like, subgroup}}
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{{#set: common name=vitamin B12 biosynthesis}}
{{#set: ec number=EC-2.3.1.41}}
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{{#set: reaction found=1}}
{{#set: gene associated=Ec-27_002090|Ec-27_003480|Ec-12_000650|Ec-12_000640}}
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{{#set: total reaction=6}}
{{#set: in pathway=PWY-6282}}
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{{#set: completion rate=17.0}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:31, 21 March 2018

Pathway COBALSYN-PWY

  • taxonomic range:
  • common name:
    • adenosylcobalamin salvage from cobinamide I
  • Synonym(s):
    • vitamin B12 biosynthesis

Reaction(s) found

1 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links