Difference between revisions of "CPD-7526"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVP-RXN GCVP-RXN] == * direction: ** REVERSIBLE * common name: ** glycine dehydrogenase (decarboxy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11484 RXN-11484] == * direction: ** LEFT-TO-RIGHT * common name: ** putative 8-amino-7-oxononan...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVP-RXN GCVP-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11484 RXN-11484] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** glycine dehydrogenase (decarboxylating)
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** putative 8-amino-7-oxononanoate synthase
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** Glycine dehydrogenase (decarboxylating)
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.4.4.2 EC-1.4.4.2]
+
** [http://enzyme.expasy.org/EC/2.3.1.47 EC-2.3.1.47]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GLY]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PROTEIN-LIPOYLLYSINE]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[AMINOMETHYLDIHYDROLIPOYL-GCVH]][c]
+
** 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pimeloyl-ACPs]][c] '''=>''' 1 [[8-AMINO-7-OXONONANOATE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 glycine[c] '''+''' 1 H+[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine[c] '''<=>''' 1 CO2[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-aminomethyldihydrolipoyl-L-lysine[c]
+
** 1 L-alanine[c] '''+''' 1 H+[c] '''+''' 1 a pimeloyl-[acp][c] '''=>''' 1 8-amino-7-oxononanoate[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-07_004110]]
+
* Gene: [[Ec-04_002200]]
−
** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[Ec-23_004150]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[GLYCINE-SYN2-PWY]], glycine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-SYN2-PWY GLYCINE-SYN2-PWY]
+
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''7''' reactions found over '''11''' reactions in the full pathway
−
* [[GLYCLEAV-PWY]], glycine cleavage: [http://metacyc.org/META/NEW-IMAGE?object=GLYCLEAV-PWY GLYCLEAV-PWY]
+
* [[PWY-7147]], 8-amino-7-oxononanoate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7147 PWY-7147]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03425 R03425]
+
{{#set: common name=putative 8-amino-7-oxononanoate synthase}}
−
* UNIPROT:
+
{{#set: ec number=EC-2.3.1.47}}
−
** [http://www.uniprot.org/uniprot/P26969 P26969]
+
{{#set: gene associated=Ec-04_002200}}
−
** [http://www.uniprot.org/uniprot/Q9UXT1 Q9UXT1]
+
{{#set: in pathway=PWY-6519|PWY-7147}}
−
** [http://www.uniprot.org/uniprot/Q9JT86 Q9JT86]
+
−
** [http://www.uniprot.org/uniprot/Q9UXT0 Q9UXT0]
+
−
** [http://www.uniprot.org/uniprot/P23378 P23378]
+
−
** [http://www.uniprot.org/uniprot/P33195 P33195]
+
−
** [http://www.uniprot.org/uniprot/O80988 O80988]
+
−
** [http://www.uniprot.org/uniprot/Q94B78 Q94B78]
+
−
** [http://www.uniprot.org/uniprot/O32915 O32915]
+
−
** [http://www.uniprot.org/uniprot/O22575 O22575]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=glycine dehydrogenase (decarboxylating)}}
+
−
{{#set: common name=Glycine dehydrogenase (decarboxylating)}}
+
−
{{#set: ec number=EC-1.4.4.2}}
+
−
{{#set: gene associated=Ec-07_004110|Ec-23_004150}}
+
−
{{#set: in pathway=GLYCINE-SYN2-PWY|GLYCLEAV-PWY}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:33, 21 March 2018

Reaction RXN-11484

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • putative 8-amino-7-oxononanoate synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6519, 8-amino-7-oxononanoate biosynthesis I: PWY-6519
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-7147, 8-amino-7-oxononanoate biosynthesis II: PWY-7147
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-7526&oldid=19686"