Difference between revisions of "CYTOCHROME-C-OXIDASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SACCHAROPINE SACCHAROPINE] == * smiles: ** C(CC[N+]C(CCC([O-])=O)C([O-])=O)CC([N+])C([O-])=O *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13443 RXN-13443] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SACCHAROPINE SACCHAROPINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13443 RXN-13443] ==
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* smiles:
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* direction:
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** C(CC[N+]C(CCC([O-])=O)C([O-])=O)CC([N+])C([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=ZDGJAHTZVHVLOT-YUMQZZPRSA-M
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
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* common name:
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** L-saccharopine
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* molecular weight:
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** 275.281   
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* Synonym(s):
 
* Synonym(s):
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** saccharopine
 
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** N6-(L-1,3-dicarboxypropyl)-L-lysine
 
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** ε-N-(L-glutar-2-yl)-L-lysine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[1.5.1.9-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-14423]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[CPD-14424]][c]
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* [[1.5.1.8-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 NAD(P)H[c] '''+''' 1 H+[c] '''+''' 1 3-oxo-docosapentaenoyl-CoA[c] '''=>''' 1 NAD(P)+[c] '''+''' 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c]
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== Genes associated with this reaction  ==
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== Pathways  ==
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* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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** '''14''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00449 C00449]
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{{#set: ec number=EC-1.1.1.330}}
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* CHEBI:
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{{#set: in pathway=PWY-7053|PWY-7606|PWY-7727}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57951 57951]
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{{#set: reconstruction category=annotation}}
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* METABOLIGHTS : MTBLC57951
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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* PUBCHEM:
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{{#set: reconstruction tool=pathwaytools}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=49791954 49791954]
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* HMDB : HMDB00279
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{{#set: smiles=C(CC[N+]C(CCC([O-])=O)C([O-])=O)CC([N+])C([O-])=O}}
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{{#set: inchi key=InChIKey=ZDGJAHTZVHVLOT-YUMQZZPRSA-M}}
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{{#set: common name=L-saccharopine}}
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{{#set: molecular weight=275.281    }}
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{{#set: common name=saccharopine|N6-(L-1,3-dicarboxypropyl)-L-lysine|ε-N-(L-glutar-2-yl)-L-lysine}}
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{{#set: consumed by=1.5.1.9-RXN}}
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{{#set: produced by=1.5.1.8-RXN}}
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Revision as of 22:56, 17 March 2018

Reaction RXN-13443

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD(P)H[c] + 1 H+[c] + 1 3-oxo-docosapentaenoyl-CoA[c] => 1 NAD(P)+[c] + 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7053, docosahexaenoate biosynthesis I (lower eukaryotes): PWY-7053
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway
  • PWY-7727, docosahexaenoate biosynthesis IV (4-desaturase, mammals): PWY-7727
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CYTOCHROME-C-OXIDASE-RXN&oldid=15104"