Difference between revisions of "Ec-00 002010"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.27-RXN 3.5.1.27-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** peptide deformylase *...")
(Created page with "Category:Gene == Gene Ec-01_005570 == * left end position: ** 4809036 * transcription direction: ** NEGATIVE * right end position: ** 4821708 * centisome position: ** 46.6...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.27-RXN 3.5.1.27-RXN] ==
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== Gene Ec-01_005570 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4809036
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* common name:
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* transcription direction:
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** peptide deformylase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.5.1.88 EC-3.5.1.88]
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** 4821708
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* centisome position:
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** 46.60445   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0018_0024
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** Esi0018_0024
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[Charged-fMET-tRNAs]][c] '''=>''' 1 [[L-Methionylaminoacyl-tRNAs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[FORMATE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 H2O[c] '''+''' 1 an N-formyl-L-methionylaminoacyl-tRNA[c] '''=>''' 1 a L-methionylaminoacyl-tRNA[c] '''+''' 1 H+[c] '''+''' 1 formate[c]
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* Reaction: [[RXN0-1321]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-24_001980]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-24_001990]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-6700]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=4809036}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04268 R04268]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: right end position=4821708}}
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** [http://www.uniprot.org/uniprot/P44786 P44786]
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{{#set: centisome position=46.60445    }}
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** [http://www.uniprot.org/uniprot/P0A6K3 P0A6K3]
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{{#set: common name=Esi_0018_0024|Esi0018_0024}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN|RXN0-1321}}
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{{#set: common name=peptide deformylase}}
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{{#set: pathway associated=PWY-6700}}
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{{#set: ec number=EC-3.5.1.88}}
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{{#set: gene associated=Ec-24_001980|Ec-24_001990}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:46, 21 March 2018

Gene Ec-01_005570

  • left end position:
    • 4809036
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4821708
  • centisome position:
    • 46.60445
  • Synonym(s):
    • Esi_0018_0024
    • Esi0018_0024

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-00_002010&oldid=21483"