Difference between revisions of "Ec-00 002010"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.27-RXN 3.5.1.27-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** peptide deformylase *...")
(Created page with "Category:Gene == Gene Ec-00_002010 == * left end position: ** 2232528 * transcription direction: ** POSITIVE * right end position: ** 2238780 * centisome position: ** 11.7...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.27-RXN 3.5.1.27-RXN] ==
+
== Gene Ec-00_002010 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 2232528
−
* common name:
+
* transcription direction:
−
** peptide deformylase
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/3.5.1.88 EC-3.5.1.88]
+
** 2238780
 +
* centisome position:
 +
** 11.783370   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0013_0196
 +
** Esi0013_0196
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3-DEHYDROQUINATE-SYNTHASE-RXN]]
−
** 1 [[WATER]][c] '''+''' 1 [[Charged-fMET-tRNAs]][c] '''=>''' 1 [[L-Methionylaminoacyl-tRNAs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[FORMATE]][c]
+
−
* With common name(s):
+
−
** 1 H2O[c] '''+''' 1 an N-formyl-L-methionylaminoacyl-tRNA[c] '''=>''' 1 a L-methionylaminoacyl-tRNA[c] '''+''' 1 H+[c] '''+''' 1 formate[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-24_001980]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-24_001990]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
** Source: [[orthology-aragem]]
 +
== Pathways associated ==
 +
* [[PWY-6164]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=2232528}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04268 R04268]
+
{{#set: transcription direction=POSITIVE}}
−
* UNIPROT:
+
{{#set: right end position=2238780}}
−
** [http://www.uniprot.org/uniprot/P44786 P44786]
+
{{#set: centisome position=11.783370    }}
−
** [http://www.uniprot.org/uniprot/P0A6K3 P0A6K3]
+
{{#set: common name=Esi_0013_0196|Esi0013_0196}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=3-DEHYDROQUINATE-SYNTHASE-RXN}}
−
{{#set: common name=peptide deformylase}}
+
{{#set: pathway associated=PWY-6164}}
−
{{#set: ec number=EC-3.5.1.88}}
+
−
{{#set: gene associated=Ec-24_001980|Ec-24_001990}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:44, 21 March 2018

Gene Ec-00_002010

  • left end position:
    • 2232528
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2238780
  • centisome position:
    • 11.783370
  • Synonym(s):
    • Esi_0013_0196
    • Esi0013_0196

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-00_002010&oldid=29005"