Difference between revisions of "Ec-00 002160"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2425 RXN-2425] == * direction: ** REVERSIBLE * common name: ** ClpP/crotonase-like domain ** Be...")
(Created page with "Category:Gene == Gene Ec-00_002160 == * left end position: ** 2469113 * transcription direction: ** NEGATIVE * right end position: ** 2470818 * centisome position: ** 13.0...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2425 RXN-2425] ==
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== Gene Ec-00_002160 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 2469113
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* common name:
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* transcription direction:
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** ClpP/crotonase-like domain
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** NEGATIVE
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** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
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* right end position:
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
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** 2470818
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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** 13.032074   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_1346_0001
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** Esi1346_0001
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
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** 1 [[3-HYDROXYADIPYL-COA]][c] '''<=>''' 1 [[TRANS-23-DEHYDROADIPYL-COA]][c] '''+''' 1 [[WATER]][c]
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* With common name(s):
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** 1 (3S)-hydroxyadipyl-CoA[c] '''<=>''' 1 trans-2,3-dehydroadipyl-coA[c] '''+''' 1 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-17_000320]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-16_003560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-16_001250]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-14_006530]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-06_001380]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-1361]], benzoyl-CoA degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1361 PWY-1361]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY0-321]], phenylacetate degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-321 PWY0-321]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2469113}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34863 34863]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2470818}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06942 R06942]
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{{#set: centisome position=13.032074    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Esi_1346_0001|Esi1346_0001}}
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{{#set: common name=ClpP/crotonase-like domain}}
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{{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}}
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{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
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{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: gene associated=Ec-17_000320|Ec-16_003560|Ec-16_001250|Ec-14_006530|Ec-06_001380}}
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{{#set: in pathway=PWY-1361|PWY0-321}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:56, 21 March 2018

Gene Ec-00_002160

  • left end position:
    • 2469113
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2470818
  • centisome position:
    • 13.032074
  • Synonym(s):
    • Esi_1346_0001
    • Esi1346_0001

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-00_002160&oldid=30474"