Difference between revisions of "Ec-00 002530"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPREDUCT-RXN GDPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribonucleoside-diph...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7810 RXN-7810] == * direction: ** LEFT-TO-RIGHT * common name: ** Prenyltransferase/squalene ox...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPREDUCT-RXN GDPREDUCT-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7810 RXN-7810] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Ribonucleoside-diphosphate reductase small chain
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** Prenyltransferase/squalene oxidase
** ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
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** EsV-1-128
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** EsV-1-180
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* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
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** [http://enzyme.expasy.org/EC/2.5.1 EC-2.5.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[Red-Thioredoxin]][c] '''+''' 1 [[GDP]][c] '''=>''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[DGDP]][c]
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** 1 [[CPD-4211]][c] '''+''' 1 [[CPD-7109]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-7105]][c]
 
* With common name(s):
 
* With common name(s):
** 1 a reduced thioredoxin[c] '''+''' 1 GDP[c] '''=>''' 1 an oxidized thioredoxin[c] '''+''' 1 H2O[c] '''+''' 1 dGDP[c]
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** 1 dimethylallyl diphosphate[c] '''+''' 1 4-prenylphlorisovalerophenone[c] '''=>''' 1 diphosphate[c] '''+''' 1 diprenylphlorisovalerophenone[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Ec-17_003700]]
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* Gene: [[Ec-07_006170]]
** [[pantograph]]-[[aragem]]
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** Source: [[annotation-esiliculosus_genome]]
* [[Ec-19_000440]]
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*** Assignment: AUTOMATED-NAME-MATCH
** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-06_005570]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-06_005120]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-11_002180]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-11_002170]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-21_002920]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
 
== Pathways  ==
* [[PWY-7222]], guanosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7222 PWY-7222]
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* [[PWY-5132]], humulone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5132 PWY-5132]
** '''4''' reactions found over '''4''' reactions in the full pathway
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** '''2''' reactions found over '''4''' reactions in the full pathway
* [[PWY-7226]], guanosine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7226 PWY-7226]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
 
** Source: [[orthology-aragem]]
 
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28030 28030]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02019 R02019]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Ribonucleoside-diphosphate reductase small chain}}
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{{#set: common name=Prenyltransferase/squalene oxidase}}
{{#set: common name=ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor}}
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{{#set: ec number=EC-2.5.1}}
{{#set: common name=EsV-1-128}}
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{{#set: gene associated=Ec-07_006170}}
{{#set: common name=EsV-1-180}}
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{{#set: in pathway=PWY-5132}}
{{#set: ec number=EC-1.17.4.1}}
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{{#set: reconstruction category=annotation}}
{{#set: gene associated=Ec-17_003700|Ec-19_000440|Ec-06_005570|Ec-06_005120|Ec-11_002180|Ec-11_002170|Ec-21_002920}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
{{#set: in pathway=PWY-7222|PWY-7226}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 14:57, 21 March 2018

Reaction RXN-7810

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Prenyltransferase/squalene oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dimethylallyl diphosphate[c] + 1 4-prenylphlorisovalerophenone[c] => 1 diphosphate[c] + 1 diprenylphlorisovalerophenone[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5132, humulone biosynthesis: PWY-5132
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links