Difference between revisions of "Ec-00 002690"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-DECARBOXYLASE-RXN TYROSINE-DECARBOXYLASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-DECARBOXYLASE-RXN TYROSINE-DECARBOXYLASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
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* common name:
 
* common name:
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** guanosine nucleotides degradation II
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** Tyrosine Decarboxylase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.1.1.25 EC-4.1.1.25]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[RXN-7609]]
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** 1 [[TYR]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[TYRAMINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** 3 associated gene(s):
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* With common name(s):
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*** [[Ec-05_000950]]
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** 1 L-tyrosine[c] '''+''' 1 H+[c] '''=>''' 1 tyramine[c] '''+''' 1 CO2[c]
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*** [[Ec-15_000820]]
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*** [[Ec-12_005060]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-14_004250]]
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* [[RXN0-366]]
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** Source: [[annotation-esiliculosus_genome]]
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** 0 associated gene:
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*** Assignment: EC-NUMBER
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-3581]], (S)-reticuline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581]
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* [[RXN0-901]]
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** '''3''' reactions found over '''11''' reactions in the full pathway
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** 2 associated gene(s):
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* [[PWY-6133]], (S)-reticuline biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6133 PWY-6133]
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*** [[Ec-20_000230]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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*** [[Ec-20_000210]]
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* [[PWY-5254]], methanofuran biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5254 PWY-5254]
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** 2 reconstruction source(s) associated:
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** '''1''' reactions found over '''8''' reactions in the full pathway
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-7297]], octopamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7297 PWY-7297]
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*** [[orthology-aragem]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reaction(s) not found ==
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* [[PWY-5474]], hydroxycinnamic acid tyramine amides biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5474 PWY-5474]
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* [http://metacyc.org/META/NEW-IMAGE?object=GUANINE-DEAMINASE-RXN GUANINE-DEAMINASE-RXN]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6802]], salidroside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6802 PWY-6802]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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* RHEA:
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{{#set: taxonomic range=TAX-3193}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14345 14345]
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{{#set: common name=guanosine nucleotides degradation II}}
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* LIGAND-RXN:
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{{#set: reaction found=3}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00736 R00736]
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{{#set: total reaction=4}}
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* UNIPROT:
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{{#set: completion rate=75.0}}
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** [http://www.uniprot.org/uniprot/Q06086 Q06086]
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** [http://www.uniprot.org/uniprot/P54768 P54768]
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** [http://www.uniprot.org/uniprot/P54769 P54769]
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** [http://www.uniprot.org/uniprot/P54770 P54770]
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** [http://www.uniprot.org/uniprot/O82417 O82417]
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** [http://www.uniprot.org/uniprot/P54771 P54771]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Tyrosine Decarboxylase}}
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{{#set: ec number=EC-4.1.1.25}}
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{{#set: gene associated=Ec-14_004250}}
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{{#set: in pathway=PWY-3581|PWY-6133|PWY-5254|PWY-7297|PWY-5474|PWY-6802}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:23, 21 March 2018

Reaction TYROSINE-DECARBOXYLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Tyrosine Decarboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-tyrosine[c] + 1 H+[c] => 1 tyramine[c] + 1 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3581, (S)-reticuline biosynthesis I: PWY-3581
    • 3 reactions found over 11 reactions in the full pathway
  • PWY-6133, (S)-reticuline biosynthesis II: PWY-6133
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-5254, methanofuran biosynthesis: PWY-5254
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-7297, octopamine biosynthesis: PWY-7297
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5474, hydroxycinnamic acid tyramine amides biosynthesis: PWY-5474
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6802, salidroside biosynthesis: PWY-6802
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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