Difference between revisions of "Ec-00 004550"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14796 RXN-14796] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-CoA oxidase, partial *...")
 
(Created page with "Category:Gene == Gene Ec-00_004550 == * left end position: ** 6342458 * transcription direction: ** POSITIVE * right end position: ** 6344585 * centisome position: ** 33.4...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14796 RXN-14796] ==
+
== Gene Ec-00_004550 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 6342458
−
* common name:
+
* transcription direction:
−
** acyl-CoA oxidase, partial
+
** POSITIVE
−
** Acyl-CoA oxidase/dehydrogenase, central domain
+
* right end position:
−
** acyl-CoA oxidase
+
** 6344585
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
+
** 33.47574   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0361_0009
 +
** Esi0361_0009
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[RIBITOL-2-DEHYDROGENASE-RXN]]
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-15684]][c] '''=>''' 1 [[CPD-15685]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 oxygen[c] '''+''' 1 5-cis, 7-trans-tetradecadienoyl-CoA[c] '''=>''' 1 2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA[c] '''+''' 1 hydrogen peroxide[c]
+
== Pathways associated ==
−
 
+
* [[RIBITOLUTIL-PWY]]
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-22_002920]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-08_006390]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-26_004320]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[PWY-7340]], 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7340 PWY-7340]
+
−
** '''1''' reactions found over '''10''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=6342458}}
−
{{#set: common name=acyl-CoA oxidase, partial}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=Acyl-CoA oxidase/dehydrogenase, central domain}}
+
{{#set: right end position=6344585}}
−
{{#set: common name=acyl-CoA oxidase}}
+
{{#set: centisome position=33.47574    }}
−
{{#set: ec number=EC-1.3.3.6}}
+
{{#set: common name=Esi_0361_0009|Esi0361_0009}}
−
{{#set: gene associated=Ec-22_002920|Ec-08_006390|Ec-26_004320}}
+
{{#set: reaction associated=RIBITOL-2-DEHYDROGENASE-RXN}}
−
{{#set: in pathway=PWY-7340}}
+
{{#set: pathway associated=RIBITOLUTIL-PWY}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 20:54, 21 March 2018

Gene Ec-00_004550

  • left end position:
    • 6342458
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6344585
  • centisome position:
    • 33.47574
  • Synonym(s):
    • Esi_0361_0009
    • Esi0361_0009

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-00_004550&oldid=30112"