Difference between revisions of "Ec-00 005410"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAMPYR-RXN PSERTRANSAMPYR-RXN] == * direction: ** REVERSIBLE * common name: ** Phosphoglyce...")
(Created page with "Category:Gene == Gene Ec-00_005410 == * left end position: ** 8625886 * transcription direction: ** POSITIVE * right end position: ** 8641939 * centisome position: ** 45.5...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAMPYR-RXN PSERTRANSAMPYR-RXN] ==
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== Gene Ec-00_005410 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 8625886
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* common name:
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* transcription direction:
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** Phosphoglycerate dehydrogenase / Phosphoserine aminotransferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.6.1.52 EC-2.6.1.52]
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** 8641939
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* centisome position:
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** 45.52776   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0442_0008
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** Esi0442_0008
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ARYL-SULFOTRANSFERASE-RXN]]
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** 1 [[GLT]][c] '''+''' 1 [[3OH-4P-OH-ALPHA-KETOBUTYRATE]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[4-PHOSPHONOOXY-THREONINE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 L-glutamate[c] '''+''' 1 (3R)-3-hydroxy-2-oxo-4 phosphonooxybutanoate[c] '''<=>''' 1 2-oxoglutarate[c] '''+''' 1 4-phospho-hydroxy-L-threonine[c]
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* Reaction: [[RXN-10614]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-10615]]
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* [[Ec-17_000820]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-10777]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY]
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*** Assignment: ec-number
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* Reaction: [[RXN-10782]]
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== Reconstruction information  ==
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** Source: [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-11058]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-11059]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-15587]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-15588]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-15589]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN6666-9]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY6666-2]]
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* [[PWY-6261]]
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* [[PWY-6313]]
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* [[PWY-6398]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=8625886}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16573 16573]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=8641939}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05085 R05085]
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{{#set: centisome position=45.52776    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Esi_0442_0008|Esi0442_0008}}
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{{#set: common name=Phosphoglycerate dehydrogenase / Phosphoserine aminotransferase}}
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{{#set: reaction associated=ARYL-SULFOTRANSFERASE-RXN|RXN-10614|RXN-10615|RXN-10777|RXN-10782|RXN-11058|RXN-11059|RXN-15587|RXN-15588|RXN-15589|RXN6666-9}}
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{{#set: ec number=EC-2.6.1.52}}
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{{#set: pathway associated=PWY6666-2|PWY-6261|PWY-6313|PWY-6398}}
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{{#set: gene associated=Ec-17_000820}}
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{{#set: in pathway=PYRIDOXSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:09, 21 March 2018

Gene Ec-00_005410

  • left end position:
    • 8625886
  • transcription direction:
    • POSITIVE
  • right end position:
    • 8641939
  • centisome position:
    • 45.52776
  • Synonym(s):
    • Esi_0442_0008
    • Esi0442_0008

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-00_005410&oldid=24951"