Difference between revisions of "Ec-01 001760"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-20 RXN1F-20] == * direction: ** LEFT-TO-RIGHT * common name: ** Magnesium chelatase subunit H...")
 
(Created page with "Category:Gene == Gene Ec-07_002870 == * left end position: ** 3080445 * transcription direction: ** POSITIVE * right end position: ** 3083396 * centisome position: ** 39.8...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-20 RXN1F-20] ==
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== Gene Ec-07_002870 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3080445
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* common name:
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* transcription direction:
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** Magnesium chelatase subunit H, putative chloroplast precursor
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** POSITIVE
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** Magnesium chelatase subunit D, putative chloroplast precursor
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* right end position:
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* ec number:
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** 3083396
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** [http://enzyme.expasy.org/EC/6.6.1.1 EC-6.6.1.1]
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* centisome position:
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** 39.88958   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0261_0032
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** Esi0261_0032
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** SDH4
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RXN-14971]]
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** 1 [[WATER]][c] '''+''' 1 [[PROTOPORPHYRIN_IX]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[MG+2]][c] '''=>''' 3 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[MG-PROTOPORPHYRIN]][c]
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** esiliculosus_genome
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* With common name(s):
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***ec-number
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** 1 H2O[c] '''+''' 1 protoporphyrin IX[c] '''+''' 1 ATP[c] '''+''' 1 Mg2+[c] '''=>''' 3 H+[c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 Mg-protoporphyrin[c]
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* [[RXN-15378]]
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** esiliculosus_genome
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
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* [[Ec-01_002840]]
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** esiliculosus_genome
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** ESILICULOSUS_GENOME
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***ec-number
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***EC-NUMBER
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== Pathways associated ==
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** [[pantograph]]-[[aragem]]
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* [[PWY-561]]
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* [[Ec-14_006490]]
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* [[PWY0-1353]]
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** ESILICULOSUS_GENOME
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* [[PWY-3781]]
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***EC-NUMBER
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* [[PWY-4302]]
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* [[Ec-02_001580]]
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* [[PWY-7279]]
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** ESILICULOSUS_GENOME
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* [[P105-PWY]]
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***EC-NUMBER
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* [[PWY-6969]]
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** [[pantograph]]-[[aragem]]
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* [[PWY-6728]]
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== Pathways  ==
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* [[PWY0-1329]]
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* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531]
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* [[PWY-7254]]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5690]]
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* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
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* [[PWY66-398]]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[TCA]]
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* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3080445}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13961 13961]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3083396}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03877 R03877]
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{{#set: centisome position=39.88958    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0261_0032|Esi0261_0032|SDH4}}
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{{#set: common name=Magnesium chelatase subunit H, putative chloroplast precursor}}
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{{#set: reaction associated=RXN-14971|RXN-15378|SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN}}
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{{#set: common name=Magnesium chelatase subunit D, putative chloroplast precursor}}
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{{#set: pathway associated=PWY-561|PWY0-1353|PWY-3781|PWY-4302|PWY-7279|P105-PWY|PWY-6969|PWY-6728|PWY0-1329|PWY-7254|PWY-5690|PWY66-398|TCA}}
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{{#set: ec number=EC-6.6.1.1}}
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{{#set: gene associated=Ec-01_002840|Ec-14_006490|Ec-02_001580}}
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{{#set: in pathway=PWY-5531|CHLOROPHYLL-SYN|PWY-7159}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 22:48, 17 March 2018

Gene Ec-07_002870

  • left end position:
    • 3080445
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3083396
  • centisome position:
    • 39.88958
  • Synonym(s):
    • Esi_0261_0032
    • Esi0261_0032
    • SDH4

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_001760&oldid=14531"