Difference between revisions of "Ec-01 002250"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11213 RXN-11213] == * direction: ** LEFT-TO-RIGHT * common name: ** Methylmalonate Semialdehyde...")
 
(Created page with "Category:Gene == Gene Ec-01_002250 == * left end position: ** 1865477 * transcription direction: ** POSITIVE * right end position: ** 1867893 * centisome position: ** 18.0...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11213 RXN-11213] ==
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== Gene Ec-01_002250 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1865477
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* common name:
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* transcription direction:
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** Methylmalonate Semialdehyde Dehydrogenase
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** POSITIVE
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** Methylmalonate-semialdehyde dehydrogenase
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* right end position:
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* ec number:
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** 1867893
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** [http://enzyme.expasy.org/EC/1.2.1.27 EC-1.2.1.27]
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* centisome position:
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** 18.078371   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0003_0046
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** Esi0003_0046
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.7.8.23-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CH3-MALONATE-S-ALD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''+''' 1 [[HCO3]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 coenzyme A[c] '''+''' 1 (S)-methylmalonate-semialdehyde[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 propanoyl-CoA[c] '''+''' 1 hydrogen carbonate[c]
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* Reaction: [[RXN-10827]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-10828]]
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* [[Ec-06_003440]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: automated-name-match
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***EC-NUMBER
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== Pathways associated ==
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* [[Ec-10_003810]]
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* [[PWY-6322]]
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** ESILICULOSUS_GENOME
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* [[PWY-7769]]
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***EC-NUMBER
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== Pathways ==
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* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1865477}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20804 20804]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=1867893}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00935 R00935]
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{{#set: centisome position=18.078371    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0003_0046|Esi0003_0046}}
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{{#set: common name=Methylmalonate Semialdehyde Dehydrogenase}}
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{{#set: reaction associated=2.7.8.23-RXN|RXN-10827|RXN-10828}}
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{{#set: common name=Methylmalonate-semialdehyde dehydrogenase}}
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{{#set: pathway associated=PWY-6322|PWY-7769}}
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{{#set: ec number=EC-1.2.1.27}}
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{{#set: gene associated=Ec-06_003440|Ec-10_003810}}
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{{#set: in pathway=VALDEG-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:50, 21 March 2018

Gene Ec-01_002250

  • left end position:
    • 1865477
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1867893
  • centisome position:
    • 18.078371
  • Synonym(s):
    • Esi_0003_0046
    • Esi0003_0046

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_002250&oldid=29677"