Difference between revisions of "Ec-01 003960"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
(Created page with "Category:Gene == Gene Ec-01_003960 == * left end position: ** 3306866 * transcription direction: ** POSITIVE * right end position: ** 3310854 * centisome position: ** 32.0...")
 
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109] ==
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== Gene Ec-01_003960 ==
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* taxonomic range:
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* left end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** 3306866
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* common name:
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* transcription direction:
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** 2-methylbutanoate biosynthesis
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** POSITIVE
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* right end position:
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** 3310854
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* centisome position:
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** 32.046898   
 
* Synonym(s):
 
* Synonym(s):
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** 2-methylbutyrate biosynthesis
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** Esi_0003_0345
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** Esi0003_0345
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** GPAT
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''4''' reactions found over '''6''' reactions in the full pathway
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* Reaction: [[RXN-10462]]
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* [[1.1.1.178-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 0 associated gene:
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*** Assignment: ec-number
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** 1 reconstruction source(s) associated:
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* Reaction: [[RXN-13805]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[2-METHYLACYL-COA-DEHYDROGENASE-RXN]]
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*** Assignment: ec-number
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** 0 associated gene:
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* Reaction: [[RXN-1381]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* [[METHYLACETOACETYLCOATHIOL-RXN]]
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* Reaction: [[RXN-15045]]
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** 3 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-26_003940]]
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*** Assignment: ec-number
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*** [[Ec-22_002850]]
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* Reaction: [[RXN-16024]]
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*** [[Ec-24_000870]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 reconstruction source(s) associated:
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*** Assignment: ec-number
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*** [[annotation-esiliculosus_genome]]
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* Reaction: [[RXN-16117]]
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*** [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[TIGLYLCOA-HYDROXY-RXN]]
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*** Assignment: ec-number
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** 5 associated gene(s):
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* Reaction: [[RXN-17016]]
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*** [[Ec-16_003560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-16_001250]]
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*** Assignment: ec-number
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*** [[Ec-06_001380]]
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* Reaction: [[RXN-17017]]
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*** [[Ec-14_006530]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-17_000320]]
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*** Assignment: ec-number
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** 2 reconstruction source(s) associated:
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* Reaction: [[RXN-17018]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Assignment: ec-number
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== Reaction(s) not found ==
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== Pathways associated ==
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* [http://metacyc.org/META/NEW-IMAGE?object=PROPIONATE-COA-TRANSFERASE-RXN PROPIONATE-COA-TRANSFERASE-RXN]
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* [[TRIGLSYN-PWY]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15031 RXN-15031]
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* [[PWY-5667]]
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* [[PWY0-1319]]
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* [[PWY-7411]]
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* [[PWY-7587]]
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* [[PWY-6453]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33208}}
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{{#set: left end position=3306866}}
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{{#set: common name=2-methylbutanoate biosynthesis}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=2-methylbutyrate biosynthesis}}
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{{#set: right end position=3310854}}
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{{#set: reaction found=4}}
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{{#set: centisome position=32.046898    }}
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{{#set: total reaction=6}}
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{{#set: common name=Esi_0003_0345|Esi0003_0345|GPAT}}
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{{#set: completion rate=67.0}}
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{{#set: reaction associated=RXN-10462|RXN-13805|RXN-1381|RXN-15045|RXN-16024|RXN-16117|RXN-17016|RXN-17017|RXN-17018}}
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{{#set: pathway associated=TRIGLSYN-PWY|PWY-5667|PWY0-1319|PWY-7411|PWY-7587|PWY-6453}}

Latest revision as of 20:20, 21 March 2018

Gene Ec-01_003960

  • left end position:
    • 3306866
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3310854
  • centisome position:
    • 32.046898
  • Synonym(s):
    • Esi_0003_0345
    • Esi0003_0345
    • GPAT

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_003960&oldid=26193"