Difference between revisions of "Ec-01 005840"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.6.5.4-RXN 1.6.5.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** monodehydroascorbate re...")
(Created page with "Category:Gene == Gene Ec-01_005840 == * left end position: ** 5090467 * transcription direction: ** NEGATIVE * right end position: ** 5097743 * centisome position: ** 49.3...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.6.5.4-RXN 1.6.5.4-RXN] ==
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== Gene Ec-01_005840 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5090467
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* common name:
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* transcription direction:
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** monodehydroascorbate reductase (NADH)
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.6.5.4 EC-1.6.5.4]
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** 5097743
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* centisome position:
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** 49.331806   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0533_0002
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** Esi0533_0002
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[NADH]][c] '''+''' 2 [[CPD-318]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[PROTON]][c] '''+''' 2 [[ASCORBATE]][c]
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* With common name(s):
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** 1 NADH[c] '''+''' 2 monodehydroascorbate radical[c] '''=>''' 1 NAD+[c] '''+''' 1 H+[c] '''+''' 2 L-ascorbate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-26_002470]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-22_003850]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-6370]], ascorbate recycling (cytosolic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6370 PWY-6370]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5090467}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14581 14581]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5097743}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00095 R00095]
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{{#set: centisome position=49.331806    }}
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* UNIPROT:
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{{#set: common name=Esi_0533_0002|Esi0533_0002}}
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** [http://www.uniprot.org/uniprot/Q9S926 Q9S926]
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{{#set: reaction associated=ATPASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q40977 Q40977]
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** [http://www.uniprot.org/uniprot/Q42711 Q42711]
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** [http://www.uniprot.org/uniprot/Q43497 Q43497]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=monodehydroascorbate reductase (NADH)}}
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{{#set: ec number=EC-1.6.5.4}}
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{{#set: gene associated=Ec-26_002470|Ec-22_003850}}
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{{#set: in pathway=PWY-6370}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:04, 21 March 2018

Gene Ec-01_005840

  • left end position:
    • 5090467
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5097743
  • centisome position:
    • 49.331806
  • Synonym(s):
    • Esi_0533_0002
    • Esi0533_0002

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_005840&oldid=24379"