Difference between revisions of "Ec-03 001890"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-126 CPD1F-126] == * smiles: ** CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC1(C(C)(C)CCCC=1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERILEU-RXN BRANCHED-CHAINAMINOTRANSFERILEU-RXN] == * direction: ** REVERSI...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-126 CPD1F-126] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERILEU-RXN BRANCHED-CHAINAMINOTRANSFERILEU-RXN] ==
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* smiles:
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* direction:
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** CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC1(C(C)(C)CCCC=1C))C)C)C)C)C)C
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** REVERSIBLE
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* inchi key:
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** InChIKey=HRQKOYFGHJYEFS-BXOLYSJBSA-N
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* common name:
 
* common name:
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** γ-carotene
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** branched-chain-amino-acid transaminase
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* molecular weight:
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* ec number:
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** 536.882   
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** [http://enzyme.expasy.org/EC/2.6.1.42 EC-2.6.1.42]
 
* Synonym(s):
 
* Synonym(s):
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** β,ψ-carotene
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN1F-151]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[ILE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[2-KETO-3-METHYL-VALERATE]][c]
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* [[RXN1F-150]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 2-oxoglutarate[c] '''+''' 1 L-isoleucine[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 (S)-3-methyl-2-oxopentanoate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-20_001390]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-12_005520]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-12_005560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-01_007170]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-12_005530]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5108]], L-isoleucine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5108 PWY-5108]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5078]], L-isoleucine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5078 PWY-5078]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIPID_MAPS : LMPR01070260
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24801 24801]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5280791 5280791]
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* LIGAND-RXN:
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* CHEMSPIDER:
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** [http://www.genome.jp/dbget-bin/www_bget?R02199 R02199]
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** [http://www.chemspider.com/Chemical-Structure.4444349.html 4444349]
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* UNIPROT:
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=27740 27740]
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** [http://www.uniprot.org/uniprot/P38891 P38891]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P47176 P47176]
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** [http://www.genome.jp/dbget-bin/www_bget?C05435 C05435]
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** [http://www.uniprot.org/uniprot/O86505 O86505]
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{{#set: smiles=CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC1(C(C)(C)CCCC=1C))C)C)C)C)C)C}}
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** [http://www.uniprot.org/uniprot/O14370 O14370]
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{{#set: inchi key=InChIKey=HRQKOYFGHJYEFS-BXOLYSJBSA-N}}
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** [http://www.uniprot.org/uniprot/O32954 O32954]
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{{#set: common name=&gamma;-carotene}}
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** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
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{{#set: molecular weight=536.882    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=&beta;,&psi;-carotene}}
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{{#set: common name=branched-chain-amino-acid transaminase}}
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{{#set: consumed by=RXN1F-151}}
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{{#set: ec number=EC-2.6.1.42}}
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{{#set: produced by=RXN1F-150}}
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{{#set: gene associated=Ec-20_001390|Ec-12_005520|Ec-12_005560|Ec-01_007170|Ec-12_005530}}
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{{#set: in pathway=ILEUSYN-PWY|ILEUDEG-PWY|PWY-5108|PWY-5103|PWY-5101|PWY-5078|PWY-5104}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 14:43, 21 March 2018

Reaction BRANCHED-CHAINAMINOTRANSFERILEU-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • branched-chain-amino-acid transaminase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine): ILEUSYN-PWY
    • 7 reactions found over 7 reactions in the full pathway
  • ILEUDEG-PWY, L-isoleucine degradation I: ILEUDEG-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-5108, L-isoleucine biosynthesis V: PWY-5108
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5103, L-isoleucine biosynthesis III: PWY-5103
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5101, L-isoleucine biosynthesis II: PWY-5101
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-5078, L-isoleucine degradation II: PWY-5078
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5104, L-isoleucine biosynthesis IV: PWY-5104
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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