Difference between revisions of "Ec-04 000920"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12567 RXN-12567] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/crotonase-like domain...")
(Created page with "Category:Gene == Gene Ec-01_002540 == * left end position: ** 2141789 * transcription direction: ** NEGATIVE * right end position: ** 2148674 * centisome position: ** 20.7...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12567 RXN-12567] ==
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== Gene Ec-01_002540 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2141789
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* common name:
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* transcription direction:
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** ClpP/crotonase-like domain
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** NEGATIVE
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** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
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* right end position:
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
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** 2148674
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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** 20.756115   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0003_0099
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** Esi0003_0099
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** QCR
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.10.2.2-RXN]]
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** 1 [[OH-HEXANOYL-COA]][c] '''=>''' 1 [[CPD0-2121]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 (S)-3-hydroxyhexanoyl-CoA[c] '''=>''' 1 trans-hex-2-enoyl-CoA[c] '''+''' 1 H2O[c]
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* Reaction: [[RXN-14107]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-15816]]
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* [[Ec-06_001380]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-15829]]
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* [[Ec-16_001250]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-16_003560]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-14_006530]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863]
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** '''7''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6692]]
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* [[PWY-7279]]
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* [[PWY-7082]]
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* [[PWY-3781]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2141789}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30549 30549]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2148674}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04749 R04749]
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{{#set: centisome position=20.756115    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0003_0099|Esi0003_0099|QCR}}
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{{#set: common name=ClpP/crotonase-like domain}}
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{{#set: reaction associated=1.10.2.2-RXN|RXN-14107|RXN-15816|RXN-15829}}
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{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
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{{#set: pathway associated=PWY-6692|PWY-7279|PWY-7082|PWY-3781}}
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{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: gene associated=Ec-06_001380|Ec-16_001250|Ec-16_003560|Ec-14_006530}}
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{{#set: in pathway=PWY-6863}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:14, 21 March 2018

Gene Ec-01_002540

  • left end position:
    • 2141789
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2148674
  • centisome position:
    • 20.756115
  • Synonym(s):
    • Esi_0003_0099
    • Esi0003_0099
    • QCR

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-04_000920&oldid=16864"