Difference between revisions of "Ec-06 004210"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-URACIL-5--METHYLTRANSFERASE-RXN TRNA-URACIL-5--METHYLTRANSFERASE-RXN] == * direction: ** LEFT-...")
(Created page with "Category:Gene == Gene Ec-06_004210 == * left end position: ** 3508247 * transcription direction: ** POSITIVE * right end position: ** 3512369 * centisome position: ** 40.0...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-URACIL-5--METHYLTRANSFERASE-RXN TRNA-URACIL-5--METHYLTRANSFERASE-RXN] ==
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== Gene Ec-06_004210 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3508247
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* common name:
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* transcription direction:
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** S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.1.1.35 EC-2.1.1.35]
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** 3512369
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* centisome position:
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** 40.058735   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0062_0102
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** Esi0062_0102
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.2.1.113-RXN]]
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** 1 [[Uracil-54-in-tRNA]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[tRNA-containing-5Me-uridine54]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
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* With common name(s):
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** 1 a uracil54 in tRNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 a 5-methyluracil54 in tRNA[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-06_000810]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=3508247}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00594 R00594]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: right end position=3512369}}
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** [http://www.uniprot.org/uniprot/P23003 P23003]
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{{#set: centisome position=40.058735    }}
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** [http://www.uniprot.org/uniprot/P31812 P31812]
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{{#set: common name=Esi_0062_0102|Esi0062_0102}}
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** [http://www.uniprot.org/uniprot/Q9PP92 Q9PP92]
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{{#set: reaction associated=3.2.1.113-RXN}}
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** [http://www.uniprot.org/uniprot/Q9JT82 Q9JT82]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase}}
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{{#set: ec number=EC-2.1.1.35}}
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{{#set: gene associated=Ec-06_000810}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:43, 21 March 2018

Gene Ec-06_004210

  • left end position:
    • 3508247
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3512369
  • centisome position:
    • 40.058735
  • Synonym(s):
    • Esi_0062_0102
    • Esi0062_0102

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_004210&oldid=28908"