Difference between revisions of "Ec-06 005300"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.99.1.2-RXN 5.99.1.2-RXN] == * direction: ** REVERSIBLE * common name: ** DNA topoisomerase ** DNA...")
(Created page with "Category:Gene == Gene Ec-06_005300 == * left end position: ** 4319941 * transcription direction: ** NEGATIVE * right end position: ** 4320519 * centisome position: ** 49.3...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.99.1.2-RXN 5.99.1.2-RXN] ==
+
== Gene Ec-06_005300 ==
−
* direction:
+
* left end position:
−
** REVERSIBLE
+
** 4319941
−
* common name:
+
* transcription direction:
−
** DNA topoisomerase
+
** NEGATIVE
−
** DNA topoisomerase type I
+
* right end position:
−
** Spo11/DNA topoisomerase VI subunit A
+
** 4320519
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/5.99.1.2 EC-5.99.1.2]
+
** 49.32702   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0052_0149
 +
** Esi0052_0149
 +
** Erv1-like
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[1.8.4.7-RXN]]
−
** 1 [[Negatively-super-coiled-DNAs]][c] '''<=>''' 1 [[Relaxed-DNAs]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 a negatively supercoiled DNA[c] '''<=>''' 1 a relaxed DNA[c]
+
* Reaction: [[RXN-15684]]
−
 
+
** Source: [[annotation-esiliculosus_genome]]
−
== Genes associated with this reaction  ==
+
*** Assignment: go-term
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[THIOL-OXIDASE-RXN]]
−
* [[Ec-12_007190]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-01_011320]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-15_001600]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-01_011310]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-03_001530]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-03_004560]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-12_007130]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-08_003340]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-24_003570]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: go-term
 +
== Pathways associated ==
 +
* [[PWY-7533]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
{{#set: left end position=4319941}}
−
** [http://www.uniprot.org/uniprot/Q7M0H8 Q7M0H8]
+
{{#set: transcription direction=NEGATIVE}}
−
** [http://www.uniprot.org/uniprot/Q07050 Q07050]
+
{{#set: right end position=4320519}}
−
** [http://www.uniprot.org/uniprot/Q9JWZ5 Q9JWZ5]
+
{{#set: centisome position=49.32702    }}
−
** [http://www.uniprot.org/uniprot/Q59046 Q59046]
+
{{#set: common name=Esi_0052_0149|Esi0052_0149|Erv1-like}}
−
** [http://www.uniprot.org/uniprot/Q9PLZ2 Q9PLZ2]
+
{{#set: reaction associated=1.8.4.7-RXN|RXN-15684|THIOL-OXIDASE-RXN}}
−
** [http://www.uniprot.org/uniprot/P47368 P47368]
+
{{#set: pathway associated=PWY-7533}}
−
** [http://www.uniprot.org/uniprot/Q9CG80 Q9CG80]
+
−
** [http://www.uniprot.org/uniprot/P43704 P43704]
+
−
** [http://www.uniprot.org/uniprot/P43012 P43012]
+
−
** [http://www.uniprot.org/uniprot/P0A620 P0A620]
+
−
** [http://www.uniprot.org/uniprot/P04786 P04786]
+
−
** [http://www.uniprot.org/uniprot/P13099 P13099]
+
−
** [http://www.uniprot.org/uniprot/P06612 P06612]
+
−
** [http://www.uniprot.org/uniprot/P11387 P11387]
+
−
** [http://www.uniprot.org/uniprot/P07799 P07799]
+
−
** [http://www.uniprot.org/uniprot/P93119 P93119]
+
−
** [http://www.uniprot.org/uniprot/O13463 O13463]
+
−
** [http://www.uniprot.org/uniprot/Q94705 Q94705]
+
−
** [http://www.uniprot.org/uniprot/Q04750 Q04750]
+
−
** [http://www.uniprot.org/uniprot/P14294 P14294]
+
−
** [http://www.uniprot.org/uniprot/P30181 P30181]
+
−
** [http://www.uniprot.org/uniprot/P34185 P34185]
+
−
** [http://www.uniprot.org/uniprot/P30189 P30189]
+
−
** [http://www.uniprot.org/uniprot/P40114 P40114]
+
−
** [http://www.uniprot.org/uniprot/P41511 P41511]
+
−
** [http://www.uniprot.org/uniprot/Q8I3Z9 Q8I3Z9]
+
−
** [http://www.uniprot.org/uniprot/Q26024 Q26024]
+
−
** [http://www.uniprot.org/uniprot/Q27529 Q27529]
+
−
** [http://www.uniprot.org/uniprot/P41512 P41512]
+
−
** [http://www.uniprot.org/uniprot/O24307 O24307]
+
−
** [http://www.uniprot.org/uniprot/P71196 P71196]
+
−
** [http://www.uniprot.org/uniprot/O70157 O70157]
+
−
** [http://www.uniprot.org/uniprot/O60126 O60126]
+
−
** [http://www.uniprot.org/uniprot/O61660 O61660]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=DNA topoisomerase}}
+
−
{{#set: common name=DNA topoisomerase type I}}
+
−
{{#set: common name=Spo11/DNA topoisomerase VI subunit A}}
+
−
{{#set: ec number=EC-5.99.1.2}}
+
−
{{#set: gene associated=Ec-12_007190|Ec-01_011320|Ec-15_001600|Ec-01_011310|Ec-03_001530|Ec-03_004560|Ec-12_007130|Ec-08_003340|Ec-24_003570}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:27, 21 March 2018

Gene Ec-06_005300

  • left end position:
    • 4319941
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4320519
  • centisome position:
    • 49.32702
  • Synonym(s):
    • Esi_0052_0149
    • Esi0052_0149
    • Erv1-like

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_005300&oldid=27081"