Difference between revisions of "Ec-08 003040"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3DJ-25 RXN3DJ-25] == * direction: ** LEFT-TO-RIGHT * common name: ** Sphingosine-1-phosphate pho...")
(Created page with "Category:Gene == Gene Ec-08_003040 == * left end position: ** 2891683 * transcription direction: ** POSITIVE * right end position: ** 2894665 * centisome position: ** 43.1...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3DJ-25 RXN3DJ-25] ==
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== Gene Ec-08_003040 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2891683
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* common name:
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* transcription direction:
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** Sphingosine-1-phosphate phosphatase
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** POSITIVE
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* right end position:
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** 2894665
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* centisome position:
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** 43.178356   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0281_0045
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** Esi0281_0045
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** QCR
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.10.2.2-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD3DJ-11366]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[SPHINGOSINE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 sphingosine 1-phosphate[c] '''=>''' 1 phosphate[c] '''+''' 1 sphingosine[c]
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* Reaction: [[RXN-14107]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-15816]]
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* [[Ec-00_007030]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-15829]]
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== Pathways  ==
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* [[PWY3DJ-11470]], sphingosine and sphingosine-1-phosphate metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-11470 PWY3DJ-11470]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6692]]
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* [[PWY-7279]]
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* [[PWY-7082]]
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* [[PWY-3781]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2891683}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27518 27518]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2894665}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06521 R06521]
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{{#set: centisome position=43.178356    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0281_0045|Esi0281_0045|QCR}}
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{{#set: common name=Sphingosine-1-phosphate phosphatase}}
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{{#set: reaction associated=1.10.2.2-RXN|RXN-14107|RXN-15816|RXN-15829}}
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{{#set: gene associated=Ec-00_007030}}
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{{#set: pathway associated=PWY-6692|PWY-7279|PWY-7082|PWY-3781}}
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{{#set: in pathway=PWY3DJ-11470}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:44, 21 March 2018

Gene Ec-08_003040

  • left end position:
    • 2891683
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2894665
  • centisome position:
    • 43.178356
  • Synonym(s):
    • Esi_0281_0045
    • Esi0281_0045
    • QCR

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-08_003040&oldid=29076"