Difference between revisions of "Ec-10 001370"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12567 RXN-12567] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/crotonase-like domain...")
(Created page with "Category:Gene == Gene Ec-10_001370 == * left end position: ** 1480477 * transcription direction: ** NEGATIVE * right end position: ** 1488497 * centisome position: ** 22.7...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12567 RXN-12567] ==
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== Gene Ec-10_001370 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1480477
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* common name:
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* transcription direction:
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** ClpP/crotonase-like domain
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** NEGATIVE
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** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
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* right end position:
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
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** 1488497
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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** 22.773119   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0073_0111
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** Esi0073_0111
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** CMK
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.7.1.148-RXN]]
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** 1 [[OH-HEXANOYL-COA]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD0-2121]][c]
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* With common name(s):
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** 1 (S)-3-hydroxyhexanoyl-CoA[c] '''=>''' 1 H2O[c] '''+''' 1 trans-hex-2-enoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-16_001250]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-14_006530]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-06_001380]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-16_003560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863]
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** '''7''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[NONMEVIPP-PWY]]
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* [[PWY-7560]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1480477}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30549 30549]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=1488497}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04749 R04749]
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{{#set: centisome position=22.773119    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0073_0111|Esi0073_0111|CMK}}
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{{#set: common name=ClpP/crotonase-like domain}}
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{{#set: reaction associated=2.7.1.148-RXN}}
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{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
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{{#set: pathway associated=NONMEVIPP-PWY|PWY-7560}}
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{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: gene associated=Ec-16_001250|Ec-14_006530|Ec-06_001380|Ec-16_003560}}
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{{#set: in pathway=PWY-6863}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:06, 21 March 2018

Gene Ec-10_001370

  • left end position:
    • 1480477
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1488497
  • centisome position:
    • 22.773119
  • Synonym(s):
    • Esi_0073_0111
    • Esi0073_0111
    • CMK

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-10_001370&oldid=24512"