Difference between revisions of "Ec-10 005410"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLALD-DEHYDROG-RXN GLYCOLALD-DEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [ht...")
(Created page with "Category:Gene == Gene Ec-10_005410 == * left end position: ** 5508891 * transcription direction: ** POSITIVE * right end position: ** 5515451 * centisome position: ** 84.7...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLALD-DEHYDROG-RXN GLYCOLALD-DEHYDROG-RXN] ==
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== Gene Ec-10_005410 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5508891
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.2.1.21 EC-1.2.1.21]
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** POSITIVE
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* right end position:
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** 5515451
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* centisome position:
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** 84.73933   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0006_0075
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** Esi0006_0075
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3PGAREARR-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[GLYCOLALDEHYDE]][c] '''=>''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[GLYCOLLATE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 glycolaldehyde[c] '''=>''' 1 NADH[c] '''+''' 2 H+[c] '''+''' 1 glycolate[c]
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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== Genes associated with this reaction  ==
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== Pathways associated ==
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== Pathways  ==
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* [[PWY-1042]]
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* [[PWY0-1280]], ethylene glycol degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1280 PWY0-1280]
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* [[P341-PWY]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-2221]]
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* [[DARABCATK12-PWY]], D-arabinose degradation I: [http://metacyc.org/META/NEW-IMAGE?object=DARABCATK12-PWY DARABCATK12-PWY]
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* [[GLUCONEO-PWY]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[GLYCOLYSIS]]
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== Reconstruction information  ==
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* [[PWY-6901]]
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* Category: [[gap-filling]]
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* [[PWY-7218]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[P124-PWY]]
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*** Tool: [[meneco]]
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* [[PWY-6886]]
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**** Comment: [[added for gapfilling]]
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* [[PWY-5723]]
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* [[PWY-6142]]
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* [[PWY-5484]]
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* [[PWY-7124]]
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* [[PWY-7003]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5508891}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20001 20001]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5515451}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01333 R01333]
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{{#set: centisome position=84.73933    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0006_0075|Esi0006_0075}}
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{{#set: ec number=EC-1.2.1.21}}
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{{#set: reaction associated=3PGAREARR-RXN}}
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{{#set: in pathway=PWY0-1280|DARABCATK12-PWY}}
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY-2221|GLUCONEO-PWY|GLYCOLYSIS|PWY-6901|PWY-7218|P124-PWY|PWY-6886|PWY-5723|PWY-6142|PWY-5484|PWY-7124|PWY-7003}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction comment=added for gapfilling}}
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Latest revision as of 20:55, 21 March 2018

Gene Ec-10_005410

  • left end position:
    • 5508891
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5515451
  • centisome position:
    • 84.73933
  • Synonym(s):
    • Esi_0006_0075
    • Esi0006_0075

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-10_005410&oldid=30347"