Difference between revisions of "Ec-12 008040"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUDPKIN-RXN DUDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate...")
(Created page with "Category:Gene == Gene Ec-12_008040 == * left end position: ** 7119835 * transcription direction: ** NEGATIVE * right end position: ** 7129266 * centisome position: ** 85.4...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUDPKIN-RXN DUDPKIN-RXN] ==
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== Gene Ec-12_008040 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 7119835
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* common name:
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* transcription direction:
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** nucleoside diphosphate kinase
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** NEGATIVE
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** Nucleoside diphosphate kinase
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* right end position:
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* ec number:
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** 7129266
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
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* centisome position:
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** 85.41016   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0520_0002
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** Esi0520_0002
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** GDH2
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLUTAMATE-DEHYDROGENASE-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[DUDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DUTP]][c]
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* With common name(s):
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** 1 ATP[c] '''+''' 1 dUDP[c] '''=>''' 1 ADP[c] '''+''' 1 dUTP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-22_003280]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-04_001140]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-07_000140]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-26_003930]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-03_001380]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-11_005170]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-11_004330]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
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** '''14''' reactions found over '''17''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Reaction: [[GLUTDEHYD-RXN]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[GLUTAMATE-DEG1-PWY]]
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* [[PWY-5913]]
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* [[ALACAT2-PWY]]
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* [[P162-PWY]]
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* [[PWY-5022]]
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* [[PWY-5675]]
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* [[PWY-6728]]
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* [[PWY-7126]]
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* [[GLUTSYNIII-PWY]]
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* [[PWY490-3]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=7119835}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28582 28582]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=7129266}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02331 R02331]
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{{#set: centisome position=85.41016    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0520_0002|Esi0520_0002|GDH2}}
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{{#set: common name=nucleoside diphosphate kinase}}
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{{#set: reaction associated=GLUTAMATE-DEHYDROGENASE-RXN|GLUTDEHYD-RXN}}
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{{#set: common name=Nucleoside diphosphate kinase}}
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{{#set: pathway associated=GLUTAMATE-DEG1-PWY|PWY-5913|ALACAT2-PWY|P162-PWY|PWY-5022|PWY-5675|PWY-6728|PWY-7126|GLUTSYNIII-PWY|PWY490-3}}
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{{#set: ec number=EC-2.7.4.6}}
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{{#set: gene associated=Ec-22_003280|Ec-04_001140|Ec-07_000140|Ec-26_003930|Ec-03_001380|Ec-11_005170|Ec-11_004330}}
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{{#set: in pathway=PWY-7184|PWY-6545|PWY0-166}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:47, 21 March 2018

Gene Ec-12_008040

  • left end position:
    • 7119835
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 7129266
  • centisome position:
    • 85.41016
  • Synonym(s):
    • Esi_0520_0002
    • Esi0520_0002
    • GDH2

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_008040&oldid=29291"