Difference between revisions of "Ec-14 006440"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-URACIL-5--METHYLTRANSFERASE-RXN TRNA-URACIL-5--METHYLTRANSFERASE-RXN] == * direction: ** LEFT-...")
 
(Created page with "Category:Gene == Gene Ec-14_006440 == * left end position: ** 5929702 * transcription direction: ** POSITIVE * right end position: ** 5935902 * centisome position: ** 90.3...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-URACIL-5--METHYLTRANSFERASE-RXN TRNA-URACIL-5--METHYLTRANSFERASE-RXN] ==
+
== Gene Ec-14_006440 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 5929702
−
* common name:
+
* transcription direction:
−
** S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/2.1.1.35 EC-2.1.1.35]
+
** 5935902
 +
* centisome position:
 +
** 90.3859   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0063_0023
 +
** Esi0063_0023
 +
** SEPSECS
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[RXN-10039]]
−
** 1 [[Uracil-54-in-tRNA]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[tRNA-containing-5Me-uridine54]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 a uracil54 in tRNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 a 5-methyluracil54 in tRNA[c] '''+''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
+
== Pathways associated ==
−
 
+
* [[PWY-6281]]
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-06_000810]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
== Pathways ==
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=5929702}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00594 R00594]
+
{{#set: transcription direction=POSITIVE}}
−
* UNIPROT:
+
{{#set: right end position=5935902}}
−
** [http://www.uniprot.org/uniprot/P23003 P23003]
+
{{#set: centisome position=90.3859    }}
−
** [http://www.uniprot.org/uniprot/P31812 P31812]
+
{{#set: common name=Esi_0063_0023|Esi0063_0023|SEPSECS}}
−
** [http://www.uniprot.org/uniprot/Q9PP92 Q9PP92]
+
{{#set: reaction associated=RXN-10039}}
−
** [http://www.uniprot.org/uniprot/Q9JT82 Q9JT82]
+
{{#set: pathway associated=PWY-6281}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase}}
+
−
{{#set: ec number=EC-2.1.1.35}}
+
−
{{#set: gene associated=Ec-06_000810}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 20:42, 21 March 2018

Gene Ec-14_006440

  • left end position:
    • 5929702
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5935902
  • centisome position:
    • 90.3859
  • Synonym(s):
    • Esi_0063_0023
    • Esi0063_0023
    • SEPSECS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-14_006440&oldid=28875"