Difference between revisions of "Ec-14 006530"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=biomass_rxn biomass_rxn] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * W...")
(Created page with "Category:Gene == Gene Ec-14_006530 == * left end position: ** 6035253 * transcription direction: ** NEGATIVE * right end position: ** 6044151 * centisome position: ** 91.9...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=biomass_rxn biomass_rxn] ==
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== Gene Ec-14_006530 ==
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* direction:
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* left end position:
−
** LEFT-TO-RIGHT
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** 6035253
 +
* transcription direction:
 +
** NEGATIVE
 +
* right end position:
 +
** 6044151
 +
* centisome position:
 +
** 91.994804   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0063_0042
 +
** Esi0063_0042
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN]]
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** 0.029 [[GLYCOLLATE]][c] '''+''' 0.35 [[PHE]][c] '''+''' 0.65 [[THR]][c] '''+''' 18.85 [[GLT]][c] '''+''' 3.8 [[GLY]][c] '''+''' 26.6 [[L-ALPHA-ALANINE]][c] '''+''' 0.1 [[L-ORNITHINE]][c] '''+''' 2.375 [[GLYCEROL]][c] '''+''' 19.3055 [[CIT]][c] '''+''' 2.7615 [[GLC]][c] '''+''' 0.2 [[ILE]][c] '''+''' 0.85 [[VAL]][c] '''+''' 12.5 [[L-ASPARTATE]][c] '''+''' 0.35 [[LYS]][c] '''+''' 331.4 [[MANNITOL]][c] '''+''' 1.35 [[PRO]][c] '''+''' 0.878 [[SUC]][c] '''+''' 0.1 [[ARG]][c] '''+''' 0.3 [[MET]][c] '''+''' 0.75 [[ASN]][c] '''+''' 10.7 [[GLN]][c] '''+''' 9.37 [[THREO-DS-ISO-CITRATE]][c] '''+''' 0.1 [[HIS]][c] '''+''' 0.115 [[TRP]][c] '''+''' 0.125 [[TYR]][c] '''+''' 0.3 [[LEU]][c] '''+''' 0.01 [[4-AMINO-BUTYRATE]][c] '''+''' 0.3 [[CYS]][c] '''+''' 0.123 [[GLYCERATE]][c] '''+''' 3.35 [[SER]][c] '''=>''' 1 [[BIOMASS]][c]
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** Source: [[orthology-aragem]]
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* With common name(s):
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* Reaction: [[ENOYL-COA-HYDRAT-RXN]]
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**
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[METHYLACYLYLCOA-HYDROXY-RXN]]
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* Gene: [[None]]
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** Source: [[annotation-esiliculosus_genome]]
−
** Source: [[manual-2_biomass_rxn]]
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*** Assignment: automated-name-match
−
== Pathways ==
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** Source: [[orthology-aragem]]
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== Reconstruction information  ==
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* Reaction: [[OHACYL-COA-DEHYDROG-RXN]]
−
* Category: [[manual]]
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** Source: [[annotation-esiliculosus_genome]]
−
** Source: [[manual-2_biomass_rxn]]
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*** Assignment: go-term
−
*** Comment: [[forfba]]
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* Reaction: [[PEROXID-RXN]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-10697]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-10698]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-10702]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-10703]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-10704]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-10705]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-11244]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-11245]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-11662]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN-11667]]
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN-12490]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN-12507]]
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN-12567]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-12570]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN-12705]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-12750]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-13616]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-14240]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-14266]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-14271]]
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN-14272]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-14273]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-15288]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-16133]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-16135]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-16558]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-17114]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-17352]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-17475]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-17776]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-17777]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-17780]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-17781]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-17785]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-17786]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-17789]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-17790]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-17793]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-17794]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-17797]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-17798]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-2425]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN-6383]]
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN-8635]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN-902]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-905]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN0-2044]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN0-5393]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[TIGLYLCOA-HYDROXY-RXN]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
** Source: [[orthology-aragem]]
 +
== Pathways associated ==
 +
* [[P162-PWY]]
 +
* [[PWY-5177]]
 +
* [[PWY-6583]]
 +
* [[VALDEG-PWY]]
 +
* [[PWY-6883]]
 +
* [[PWY-7656]]
 +
* [[PWY-5138]]
 +
* [[PWY-5136]]
 +
* [[PWY-7778]]
 +
* [[PWY-7779]]
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* [[PWY0-1337]]
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* [[PWY-6824]]
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* [[PWY-7574]]
 +
* [[PWY-7094]]
 +
* [[PWY-7654]]
 +
* [[P3-PWY]]
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* [[PWY66-391]]
 +
* [[PWY-5466]]
 +
* [[PWY-5789]]
 +
* [[PWY-5461]]
 +
* [[FAO-PWY]]
 +
* [[PWY-5469]]
 +
* [[CENTFERM-PWY]]
 +
* [[PWY-6945]]
 +
* [[PWY0-321]]
 +
* [[PWY-5743]]
 +
* [[ILEUDEG-PWY]]
 +
* [[PWY-5744]]
 +
* [[PWY-7007]]
 +
* [[PWY-7726]]
 +
* [[PWY-6435]]
 +
* [[PWY-7214]]
 +
* [[PWY-7046]]
 +
* [[PWY-7216]]
 +
* [[PWY-1361]]
 +
* [[PWY-7606]]
 +
* [[PWY-5109]]
 +
* [[PWY-7445]]
 +
* [[PWY-6946]]
 +
* [[PWY-81]]
 +
* [[PWY-6944]]
 +
* [[PWY-735]]
 +
* [[PWY-7401]]
 +
* [[PWY-6863]]
 +
* [[PWY-3941]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=6035253}}
−
{{#set: gene associated=None}}
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{{#set: transcription direction=NEGATIVE}}
−
{{#set: in pathway=}}
+
{{#set: right end position=6044151}}
−
{{#set: reconstruction category=manual}}
+
{{#set: centisome position=91.994804    }}
−
{{#set: reconstruction source=manual-2_biomass_rxn}}
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{{#set: common name=Esi_0063_0042|Esi0063_0042}}
−
{{#set: reconstruction comment=forfba}}
+
{{#set: reaction associated=3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN|ENOYL-COA-HYDRAT-RXN|METHYLACYLYLCOA-HYDROXY-RXN|OHACYL-COA-DEHYDROG-RXN|PEROXID-RXN|RXN-10697|RXN-10698|RXN-10702|RXN-10703|RXN-10704|RXN-10705|RXN-11244|RXN-11245|RXN-11662|RXN-11667|RXN-12490|RXN-12507|RXN-12567|RXN-12570|RXN-12705|RXN-12750|RXN-13616|RXN-14240|RXN-14266|RXN-14271|RXN-14272|RXN-14273|RXN-15288|RXN-16133|RXN-16135|RXN-16558|RXN-17114|RXN-17352|RXN-17475|RXN-17776|RXN-17777|RXN-17780|RXN-17781|RXN-17785|RXN-17786|RXN-17789|RXN-17790|RXN-17793|RXN-17794|RXN-17797|RXN-17798|RXN-2425|RXN-6383|RXN-8635|RXN-902|RXN-905|RXN0-2044|RXN0-5393|TIGLYLCOA-HYDROXY-RXN}}
 +
{{#set: pathway associated=P162-PWY|PWY-5177|PWY-6583|VALDEG-PWY|PWY-6883|PWY-7656|PWY-5138|PWY-5136|PWY-7778|PWY-7779|PWY0-1337|PWY-6824|PWY-7574|PWY-7094|PWY-7654|P3-PWY|PWY66-391|PWY-5466|PWY-5789|PWY-5461|FAO-PWY|PWY-5469|CENTFERM-PWY|PWY-6945|PWY0-321|PWY-5743|ILEUDEG-PWY|PWY-5744|PWY-7007|PWY-7726|PWY-6435|PWY-7214|PWY-7046|PWY-7216|PWY-1361|PWY-7606|PWY-5109|PWY-7445|PWY-6946|PWY-81|PWY-6944|PWY-735|PWY-7401|PWY-6863|PWY-3941}}

Latest revision as of 20:12, 21 March 2018

Gene Ec-14_006530

  • left end position:
    • 6035253
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 6044151
  • centisome position:
    • 91.994804
  • Synonym(s):
    • Esi_0063_0042
    • Esi0063_0042

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-14_006530&oldid=25255"