Difference between revisions of "Ec-16 001250"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMPSYN-RXN AMPSYN-RXN] == * direction: ** REVERSIBLE * common name: ** Adenylosuccinate lyase C-ter...")
(Created page with "Category:Gene == Gene Ec-16_001250 == * left end position: ** 1385538 * transcription direction: ** POSITIVE * right end position: ** 1398244 * centisome position: ** 25.9...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMPSYN-RXN AMPSYN-RXN] ==
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== Gene Ec-16_001250 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 1385538
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* common name:
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* transcription direction:
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** Adenylosuccinate lyase C-terminal
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.3.2.2 EC-4.3.2.2]
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** 1398244
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* centisome position:
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** 25.957808   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0194_0050
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** Esi0194_0050
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ENOYL-COA-HYDRAT-RXN]]
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** 1 [[ADENYLOSUCC]][c] '''<=>''' 1 [[AMP]][c] '''+''' 1 [[FUM]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 adenylo-succinate[c] '''<=>''' 1 AMP[c] '''+''' 1 fumarate[c]
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* Reaction: [[METHYLACYLYLCOA-HYDROXY-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-10697]]
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* Gene: [[Ec-11_002070]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-10704]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-10705]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-11244]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12567]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13616]]
 +
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14266]]
 +
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14272]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14273]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16135]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16558]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17114]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17475]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17776]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17780]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17785]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17789]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-2425]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-902]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-5393]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[TIGLYLCOA-HYDROXY-RXN]]
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* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6435]]
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* [[PWY-7656]]
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* [[PWY-7046]]
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* [[PWY-81]]
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* [[PWY-1361]]
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* [[PWY-735]]
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* [[PWY-7606]]
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* [[PWY-5109]]
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* [[PWY0-321]]
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* [[VALDEG-PWY]]
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* [[PWY-7094]]
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* [[PWY-7654]]
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* [[PWY-5138]]
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* [[PWY66-391]]
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* [[PWY-5136]]
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* [[PWY-6863]]
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* [[PWY-7007]]
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* [[ILEUDEG-PWY]]
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* [[PWY0-1337]]
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* [[FAO-PWY]]
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* [[PWY-7726]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1385538}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16853 16853]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=1398244}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01083 R01083]
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{{#set: centisome position=25.957808    }}
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* UNIPROT:
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{{#set: common name=Esi_0194_0050|Esi0194_0050}}
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** [http://www.uniprot.org/uniprot/P21265 P21265]
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{{#set: reaction associated=ENOYL-COA-HYDRAT-RXN|METHYLACYLYLCOA-HYDROXY-RXN|RXN-10697|RXN-10704|RXN-10705|RXN-11244|RXN-12567|RXN-13616|RXN-14266|RXN-14272|RXN-14273|RXN-16135|RXN-16558|RXN-17114|RXN-17475|RXN-17776|RXN-17780|RXN-17785|RXN-17789|RXN-2425|RXN-902|RXN0-5393|TIGLYLCOA-HYDROXY-RXN}}
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** [http://www.uniprot.org/uniprot/Q58339 Q58339]
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{{#set: pathway associated=PWY-6435|PWY-7656|PWY-7046|PWY-81|PWY-1361|PWY-735|PWY-7606|PWY-5109|PWY0-321|VALDEG-PWY|PWY-7094|PWY-7654|PWY-5138|PWY66-391|PWY-5136|PWY-6863|PWY-7007|ILEUDEG-PWY|PWY0-1337|FAO-PWY|PWY-7726}}
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** [http://www.uniprot.org/uniprot/Q9CF40 Q9CF40]
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** [http://www.uniprot.org/uniprot/Q9PJ88 Q9PJ88]
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** [http://www.uniprot.org/uniprot/Q9JSP3 Q9JSP3]
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** [http://www.uniprot.org/uniprot/P0AB89 P0AB89]
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** [http://www.uniprot.org/uniprot/O65180 O65180]
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** [http://www.uniprot.org/uniprot/P12047 P12047]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Adenylosuccinate lyase C-terminal}}
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{{#set: ec number=EC-4.3.2.2}}
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{{#set: gene associated=Ec-11_002070}}
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{{#set: in pathway=PWY-7219}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:58, 21 March 2018

Gene Ec-16_001250

  • left end position:
    • 1385538
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1398244
  • centisome position:
    • 25.957808
  • Synonym(s):
    • Esi_0194_0050
    • Esi0194_0050

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-16_001250&oldid=30628"