Difference between revisions of "Ec-18 002810"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NICOTINATEPRIBOSYLTRANS-RXN NICOTINATEPRIBOSYLTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAG...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NICOTINATEPRIBOSYLTRANS-RXN NICOTINATEPRIBOSYLTRANS-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
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** nicotinate phosphoribosyltransferase
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** heme biosynthesis I (aerobic)
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* ec number:
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** [http://enzyme.expasy.org/EC/6.3.4.21 EC-6.3.4.21]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''4''' reactions in the full pathway
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** 1 [[PRPP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NIACINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[Pi]][c]
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* [[PROTOHEMEFERROCHELAT-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 5-phospho-α-D-ribose 1-diphosphate[c] '''+''' 1 H2O[c] '''+''' 1 nicotinate[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 ADP[c] '''+''' 1 β-nicotinate D-ribonucleotide[c] '''+''' 1 phosphate[c]
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*** [[Ec-01_005360]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
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* [[Ec-27_002350]]
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* [[PROTOPORGENOXI-RXN]]
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** ESILICULOSUS_GENOME
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** 1 associated gene(s):
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***GO-TERM
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*** [[Ec-25_003100]]
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** [[pantograph]]-[[aragem]]
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY]
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*** [[orthology-aragem]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[RXN0-1461]]
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* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
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** 2 associated gene(s):
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** '''5''' reactions found over '''11''' reactions in the full pathway
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*** [[Ec-08_001470]]
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== Reconstruction information  ==
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*** [[Ec-19_005390]]
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* Category: [[orthology]]
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** 2 reconstruction source(s) associated:
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** Source: [[orthology-aragem]]
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*** [[annotation-esiliculosus_genome]]
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*** Tool: [[pantograph]]
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*** [[orthology-aragem]]
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* Category: [[annotation]]
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* [[UROGENDECARBOX-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 3 associated gene(s):
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*** Tool: [[pathwaytools]]
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*** [[Ec-24_000620]]
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*** [[Ec-01_000360]]
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*** [[Ec-24_000650]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13393 13393]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II]
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* LIGAND-RXN:
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* SGD-PATHWAY : HEME-BIOSYNTHESIS-II
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** [http://www.genome.jp/dbget-bin/www_bget?R01724 R01724]
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* PLASMOCYC : HEME-BIOSYNTHESIS-II
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* UNIPROT:
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* HUMANCYC : HEME-BIOSYNTHESIS-II
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** [http://www.uniprot.org/uniprot/P22253 P22253]
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/P18133 P18133]
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.uniprot.org/uniprot/P39683 P39683]
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{{#set: common name=heme biosynthesis I (aerobic)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=4}}
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{{#set: common name=nicotinate phosphoribosyltransferase}}
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{{#set: total reaction=4}}
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{{#set: ec number=EC-6.3.4.21}}
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{{#set: completion rate=100.0}}
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{{#set: gene associated=Ec-27_002350}}
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{{#set: in pathway=PYRIDNUCSAL-PWY|PWY-5381}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 14:32, 21 March 2018

Pathway HEME-BIOSYNTHESIS-II

  • taxonomic range:
  • common name:
    • heme biosynthesis I (aerobic)
  • Synonym(s):

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

  • ECOCYC:
  • SGD-PATHWAY : HEME-BIOSYNTHESIS-II
  • PLASMOCYC : HEME-BIOSYNTHESIS-II
  • HUMANCYC : HEME-BIOSYNTHESIS-II




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