Difference between revisions of "Ec-18 003420"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8635 RXN-8635] == * direction: ** LEFT-TO-RIGHT * common name: ** peroxidase * ec number: ** [h...")
(Created page with "Category:Gene == Gene Ec-18_003420 == * left end position: ** 3416508 * transcription direction: ** POSITIVE * right end position: ** 3426404 * centisome position: ** 69.3...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8635 RXN-8635] ==
+
== Gene Ec-18_003420 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 3416508
−
* common name:
+
* transcription direction:
−
** peroxidase
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/1.11.1.7 EC-1.11.1.7]
+
** 3426404
 +
* centisome position:
 +
** 69.34880   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0022_0141
 +
** Esi0022_0141
 +
** PDH
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[PYFLAVOXRE-RXN]]
−
** 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-8653]][c] '''=>''' 1 [[CPD-8890]][c] '''+''' 2 [[WATER]][c]
+
−
* With common name(s):
+
−
** 1 hydrogen peroxide[c] '''+''' 1 betanidin[c] '''=>''' 1 betanidin quinone[c] '''+''' 2 H2O[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Ec-00_008250]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-04_004690]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-14_006530]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-24_002030]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-28_003740]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-05_002520]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-11_001530]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-02_003170]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-02_001740]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-02_001210]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-27_004950]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-00_008210]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-11_003410]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-02_001880]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-06_003550]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-00_008220]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-14_002880]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-00_008240]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-17_002450]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-16_000240]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-19_001450]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-19_000230]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-26_000310]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-08_006020]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-02_000470]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-17_002430]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-00_010030]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: automated-name-match
−
* Gene: [[Ec-05_003380]]
+
* Reaction: [[PYRUFLAVREDUCT-RXN]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: automated-name-match
−
* Gene: [[Ec-20_002770]]
+
* Reaction: [[PYRUVDEH-RXN]]
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN-12508]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: ec-number
−
* Gene: [[Ec-24_002370]]
+
* Reaction: [[RXN-12583]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: ec-number
−
== Pathways  ==
+
** Source: [[orthology-aragem]]
−
* [[PWY-5461]], betanidin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5461 PWY-5461]
+
* Reaction: [[RXN0-1134]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[PWY-7384]]
 +
* [[P23-PWY]]
 +
* [[PWY-5493]]
 +
* [[PWY-6587]]
 +
* [[PWY-5497]]
 +
* [[PWY-6588]]
 +
* [[P42-PWY]]
 +
* [[P142-PWY]]
 +
* [[PWY-6886]]
 +
* [[PWY-6876]]
 +
* [[NPGLUCAT-PWY]]
 +
* [[CENTFERM-PWY]]
 +
* [[PYRUVDEHYD-PWY]]
 +
* [[PWY-5600]]
 +
* [[PWY-6142]]
 +
* [[PWY-5482]]
 +
* [[PWY-5483]]
 +
* [[PWY-6583]]
 +
* [[PWY-7218]]
 +
* [[PWY-5392]]
 +
* [[PWY-5537]]
 +
* [[GLUDEG-II-PWY]]
 +
* [[PWY-6863]]
 +
* [[PWY-5538]]
 +
* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=3416508}}
−
{{#set: common name=peroxidase}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: ec number=EC-1.11.1.7}}
+
{{#set: right end position=3426404}}
−
{{#set: gene associated=Ec-00_008250|Ec-04_004690|Ec-14_006530|Ec-24_002030|Ec-28_003740|Ec-05_002520|Ec-11_001530|Ec-02_003170|Ec-02_001740|Ec-02_001210|Ec-27_004950|Ec-00_008210|Ec-11_003410|Ec-02_001880|Ec-06_003550|Ec-00_008220|Ec-14_002880|Ec-00_008240|Ec-17_002450|Ec-16_000240|Ec-19_001450|Ec-19_000230|Ec-26_000310|Ec-08_006020|Ec-02_000470|Ec-17_002430|Ec-00_010030|Ec-05_003380|Ec-20_002770|Ec-24_002370}}
+
{{#set: centisome position=69.34880    }}
−
{{#set: in pathway=PWY-5461}}
+
{{#set: common name=Esi_0022_0141|Esi0022_0141|PDH}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reaction associated=PYFLAVOXRE-RXN|PYRUFLAVREDUCT-RXN|PYRUVDEH-RXN|RXN-12508|RXN-12583|RXN0-1134}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: pathway associated=PWY-7384|P23-PWY|PWY-5493|PWY-6587|PWY-5497|PWY-6588|P42-PWY|P142-PWY|PWY-6886|PWY-6876|NPGLUCAT-PWY|CENTFERM-PWY|PYRUVDEHYD-PWY|PWY-5600|PWY-6142|PWY-5482|PWY-5483|PWY-6583|PWY-7218|PWY-5392|PWY-5537|GLUDEG-II-PWY|PWY-6863|PWY-5538|GLYCOLYSIS-TCA-GLYOX-BYPASS}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:50, 21 March 2018

Gene Ec-18_003420

  • left end position:
    • 3416508
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3426404
  • centisome position:
    • 69.34880
  • Synonym(s):
    • Esi_0022_0141
    • Esi0022_0141
    • PDH

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-18_003420&oldid=29691"