Difference between revisions of "Ec-23 001510"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNKIN-RXN PNKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyridoxamine kinase * ec nu...")
(Created page with "Category:Gene == Gene Ec-23_001510 == * left end position: ** 1537688 * transcription direction: ** NEGATIVE * right end position: ** 1540331 * centisome position: ** 31.7...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNKIN-RXN PNKIN-RXN] ==
+
== Gene Ec-23_001510 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 1537688
−
* common name:
+
* transcription direction:
−
** Pyridoxamine kinase
+
** NEGATIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/2.7.1.35 EC-2.7.1.35]
+
** 1540331
 +
* centisome position:
 +
** 31.773912   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0042_0143
 +
** Esi0042_0143
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[1.14.11.2-RXN]]
−
** 1 [[ATP]][c] '''+''' 1 [[PYRIDOXINE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXINE-5P]][c]
+
−
* With common name(s):
+
−
** 1 ATP[c] '''+''' 1 pyridoxine[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 pyridoxine 5'-phosphate[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-02_001230]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[aragem]]
+
−
== Pathways  ==
+
−
* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
+
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
+
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-aragem]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: automated-name-match
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=1537688}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25108 25108]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=1540331}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01909 R01909]
+
{{#set: centisome position=31.773912    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=Esi_0042_0143|Esi0042_0143}}
−
{{#set: common name=Pyridoxamine kinase}}
+
{{#set: reaction associated=1.14.11.2-RXN}}
−
{{#set: ec number=EC-2.7.1.35}}
+
−
{{#set: gene associated=Ec-02_001230}}
+
−
{{#set: in pathway=PWY-7204|PWY-7282|PLPSAL-PWY}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:23, 21 March 2018

Gene Ec-23_001510

  • left end position:
    • 1537688
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1540331
  • centisome position:
    • 31.773912
  • Synonym(s):
    • Esi_0042_0143
    • Esi0042_0143

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-23_001510&oldid=26551"