Difference between revisions of "Ec-26 004120"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** tubulin-tyrosine liga...")
 
(Created page with "Category:Gene == Gene Ec-26_004120 == * left end position: ** 4365756 * transcription direction: ** POSITIVE * right end position: ** 4375368 * centisome position: ** 66.3...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] ==
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== Gene Ec-26_004120 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4365756
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* common name:
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* transcription direction:
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** tubulin-tyrosine ligase
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** POSITIVE
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** Tubulin-tyrosine ligase/Tubulin polyglutamylase
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* right end position:
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* ec number:
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** 4375368
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** [http://enzyme.expasy.org/EC/6.3.2.25 EC-6.3.2.25]
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* centisome position:
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** 66.31513   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0349_0004
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** Esi0349_0004
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2PGADEHYDRAT-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[Detyrosinated-alpha--tubulins]][c] '''+''' 1 [[TYR]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Alpha-tubulins]][c] '''+''' 1 [[Pi]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 ATP[c] '''+''' 1 detyrosinated α-tubulin[c] '''+''' 1 L-tyrosine[c] '''=>''' 1 ADP[c] '''+''' 1 α-tubulin[c] '''+''' 1 phosphate[c]
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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== Genes associated with this reaction  ==
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* Reaction: [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-aragem]]
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* [[Ec-02_002820]]
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== Pathways associated ==
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** ESILICULOSUS_GENOME
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* [[GLYCOLYSIS]]
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***GO-TERM
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* [[PWY-6901]]
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* [[Ec-02_000600]]
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* [[P124-PWY]]
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** ESILICULOSUS_GENOME
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* [[PWY-6142]]
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***AUTOMATED-NAME-MATCH
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* [[P341-PWY]]
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* [[Ec-18_002200]]
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* [[PWY-1622]]
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** ESILICULOSUS_GENOME
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* [[GLUCONEO-PWY]]
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***AUTOMATED-NAME-MATCH
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* [[PWY-6886]]
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* [[Ec-01_007560]]
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* [[PWY-6707]]
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** ESILICULOSUS_GENOME
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* [[PWY-1042]]
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***AUTOMATED-NAME-MATCH
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* [[NPGLUCAT-PWY]]
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* [[Ec-00_005910]]
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* [[PWY-5723]]
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** ESILICULOSUS_GENOME
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* [[ANAGLYCOLYSIS-PWY]]
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***GO-TERM
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* [[PWY-5484]]
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* [[Ec-05_000280]]
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* [[PWY-7124]]
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** ESILICULOSUS_GENOME
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* [[PWY-7003]]
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***AUTOMATED-NAME-MATCH
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* [[PWY-2221]]
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* [[Ec-19_000160]]
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* [[PWY-6416]]
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** ESILICULOSUS_GENOME
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* [[PWY-6163]]
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***GO-TERM
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* [[PWY-7218]]
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* [[Ec-01_004520]]
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* [[QUINATEDEG-PWY]]
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** ESILICULOSUS_GENOME
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* [[P122-PWY]]
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***AUTOMATED-NAME-MATCH
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* [[PWY66-399]]
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* [[Ec-07_003840]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-14_002580]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-03_004300]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_008800]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-19_002060]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-20_004590]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-02_006230]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-26_006110]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-19_003290]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-02_000590]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-18_003990]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=4365756}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04730 R04730]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: right end position=4375368}}
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** [http://www.uniprot.org/uniprot/P38160 P38160]
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{{#set: centisome position=66.31513    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0349_0004|Esi0349_0004}}
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{{#set: common name=tubulin-tyrosine ligase}}
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{{#set: reaction associated=2PGADEHYDRAT-RXN|3-DEHYDROQUINATE-DEHYDRATASE-RXN}}
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{{#set: common name=Tubulin-tyrosine ligase/Tubulin polyglutamylase}}
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{{#set: pathway associated=GLYCOLYSIS|PWY-6901|P124-PWY|PWY-6142|P341-PWY|PWY-1622|GLUCONEO-PWY|PWY-6886|PWY-6707|PWY-1042|NPGLUCAT-PWY|PWY-5723|ANAGLYCOLYSIS-PWY|PWY-5484|PWY-7124|PWY-7003|PWY-2221|PWY-6416|PWY-6163|PWY-7218|QUINATEDEG-PWY|P122-PWY|PWY66-399}}
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{{#set: ec number=EC-6.3.2.25}}
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{{#set: gene associated=Ec-02_002820|Ec-02_000600|Ec-18_002200|Ec-01_007560|Ec-00_005910|Ec-05_000280|Ec-19_000160|Ec-01_004520|Ec-07_003840|Ec-14_002580|Ec-03_004300|Ec-06_008800|Ec-19_002060|Ec-20_004590|Ec-02_006230|Ec-26_006110|Ec-19_003290|Ec-02_000590|Ec-18_003990}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:51, 21 March 2018

Gene Ec-26_004120

  • left end position:
    • 4365756
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4375368
  • centisome position:
    • 66.31513
  • Synonym(s):
    • Esi_0349_0004
    • Esi0349_0004

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-26_004120&oldid=29764"