Difference between revisions of "Ec-27 005750"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-DECARBOXYLASE-RXN TYROSINE-DECARBOXYLASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
(Created page with "Category:Gene == Gene Ec-27_005750 == * left end position: ** 5321274 * transcription direction: ** NEGATIVE * right end position: ** 5341967 * centisome position: ** 82.5...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-DECARBOXYLASE-RXN TYROSINE-DECARBOXYLASE-RXN] ==
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== Gene Ec-27_005750 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5321274
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* common name:
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* transcription direction:
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** Tyrosine Decarboxylase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.1.1.25 EC-4.1.1.25]
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** 5341967
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* centisome position:
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** 82.501564   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0000_0131
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** Esi0000_0131
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.4.11-RXN]]
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** 1 [[TYR]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[TYRAMINE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 L-tyrosine[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 tyramine[c]
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* Reaction: [[RXN-13334]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-16261]]
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* [[Ec-14_004250]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***EC-NUMBER
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== Pathways associated ==
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== Pathways  ==
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* [[PWY-6367]]
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* [[PWY-3581]], (S)-reticuline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581]
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* [[PWY-6351]]
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** '''3''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-7039]]
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* [[PWY-6133]], (S)-reticuline biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6133 PWY-6133]
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* [[LIPASYN-PWY]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5254]], methanofuran biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5254 PWY-5254]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7297]], octopamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7297 PWY-7297]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5474]], hydroxycinnamic acid tyramine amides biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5474 PWY-5474]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6802]], salidroside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6802 PWY-6802]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5321274}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14345 14345]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5341967}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00736 R00736]
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{{#set: centisome position=82.501564    }}
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* UNIPROT:
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{{#set: common name=Esi_0000_0131|Esi0000_0131}}
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** [http://www.uniprot.org/uniprot/Q06086 Q06086]
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{{#set: reaction associated=3.1.4.11-RXN|RXN-13334|RXN-16261}}
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** [http://www.uniprot.org/uniprot/P54768 P54768]
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{{#set: pathway associated=PWY-6367|PWY-6351|PWY-7039|LIPASYN-PWY}}
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** [http://www.uniprot.org/uniprot/P54769 P54769]
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** [http://www.uniprot.org/uniprot/P54770 P54770]
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** [http://www.uniprot.org/uniprot/O82417 O82417]
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** [http://www.uniprot.org/uniprot/P54771 P54771]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Tyrosine Decarboxylase}}
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{{#set: ec number=EC-4.1.1.25}}
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{{#set: gene associated=Ec-14_004250}}
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{{#set: in pathway=PWY-3581|PWY-6133|PWY-5254|PWY-7297|PWY-5474|PWY-6802}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:15, 21 March 2018

Gene Ec-27_005750

  • left end position:
    • 5321274
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5341967
  • centisome position:
    • 82.501564
  • Synonym(s):
    • Esi_0000_0131
    • Esi0000_0131

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_005750&oldid=25625"