Difference between revisions of "Ec-sdr f 000030"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ENOYL-COA-DELTA-ISOM-RXN ENOYL-COA-DELTA-ISOM-RXN] == * direction: ** REVERSIBLE * common name: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUINOPRIBOTRANS-RXN QUINOPRIBOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nicotin...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ENOYL-COA-DELTA-ISOM-RXN ENOYL-COA-DELTA-ISOM-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUINOPRIBOTRANS-RXN QUINOPRIBOTRANS-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Enoyl-CoA hydratase/isomerase family protein
+
** nicotinate-nucleotide diphosphorylase (carboxylating)
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/5.3.3.8 EC-5.3.3.8]
+
** [http://enzyme.expasy.org/EC/2.4.2.19 EC-2.4.2.19]
 
* Synonym(s):
 
* Synonym(s):
−
** probable enoyl-CoA hydratase/isomerase
 
−
** probable enoyl CoA-hydratase/isomerase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CIS-DELTA3-ENOYL-COA]][c] '''<=>''' 1 [[TRANS-D2-ENOYL-COA]][c]
+
** 2 [[PROTON]][c] '''+''' 1 [[PRPP]][c] '''+''' 1 [[QUINOLINATE]][c] '''=>''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a cis-3-enoyl-CoA[c] '''<=>''' 1 a trans-2-enoyl-CoA[c]
+
** 2 H+[c] '''+''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c] '''+''' 1 quinolinate[c] '''=>''' 1 &beta;-nicotinate D-ribonucleotide[c] '''+''' 1 diphosphate[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-20_003150]]
+
* Gene: [[Ec-27_002350]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: GO-TERM
 +
* Gene: [[Ec-09_003390]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-05_000790]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5137]], fatty acid &beta;-oxidation III (unsaturated, odd number): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5137 PWY-5137]
+
* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5653 PWY-5653]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[FAO-PWY]], fatty acid &beta;-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
+
* [[PWY-7342]], superpathway of nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7342 PWY-7342]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''13''' reactions in the full pathway
 +
* [[PYRIDNUCSYN-PWY]], NAD biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5316]], nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5316 PWY-5316]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12733 12733]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03348 R03348]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P21177 P21177]
+
** [http://www.uniprot.org/uniprot/Q9JSX8 Q9JSX8]
−
** [http://www.uniprot.org/uniprot/P42126 P42126]
+
** [http://www.uniprot.org/uniprot/Q57916 Q57916]
−
** [http://www.uniprot.org/uniprot/P07896 P07896]
+
** [http://www.uniprot.org/uniprot/P30011 P30011]
−
** [http://www.uniprot.org/uniprot/P23965 P23965]
+
** [http://www.uniprot.org/uniprot/P46714 P46714]
−
** [http://www.uniprot.org/uniprot/Q64592 Q64592]
+
** [http://www.uniprot.org/uniprot/Q15274 Q15274]
−
** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
+
** [http://www.uniprot.org/uniprot/P77938 P77938]
−
** [http://www.uniprot.org/uniprot/P42125 P42125]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
+
{{#set: common name=nicotinate-nucleotide diphosphorylase (carboxylating)}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: ec number=EC-2.4.2.19}}
−
{{#set: common name=Enoyl-CoA hydratase/isomerase family protein}}
+
{{#set: gene associated=Ec-27_002350|Ec-09_003390|Ec-05_000790}}
−
{{#set: ec number=EC-5.3.3.8}}
+
{{#set: in pathway=PWY-5653|PWY-7342|PYRIDNUCSYN-PWY|PWY-5316}}
−
{{#set: common name=probable enoyl-CoA hydratase/isomerase|probable enoyl CoA-hydratase/isomerase}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: gene associated=Ec-20_003150}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: in pathway=PWY-5137|FAO-PWY}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 14:50, 21 March 2018

Reaction QUINOPRIBOTRANS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • nicotinate-nucleotide diphosphorylase (carboxylating)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5653, NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: PWY-5653
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7342, superpathway of nicotine biosynthesis: PWY-7342
    • 4 reactions found over 13 reactions in the full pathway
  • PYRIDNUCSYN-PWY, NAD biosynthesis I (from aspartate): PYRIDNUCSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-5316, nicotine biosynthesis: PWY-5316
    • 3 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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