Difference between revisions of "ExchangeSeed NITRATE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-KETO-ADIPATE-DEHYDROG-RXN 2-KETO-ADIPATE-DEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * Synonym...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed_NITRATE ExchangeSeed_NITRATE] == * direction: ** REVERSIBLE * Synonym(s): == Reaction...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-KETO-ADIPATE-DEHYDROG-RXN 2-KETO-ADIPATE-DEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed_NITRATE ExchangeSeed_NITRATE] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[2K-ADIPATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[GLUTARYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1.0 [[NITRATE]][C-BOUNDARY] '''<=>''' 1.0 [[NITRATE]][e]
 
* With common name(s):
 
* With common name(s):
** 1 2-oxoadipate[c] '''+''' 1 coenzyme A[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 glutaryl-CoA[c] '''+''' 1 CO2[c]
+
** 1.0 nitrate[C-BOUNDARY] '''<=>''' 1.0 nitrate[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Ec-27_004160]]
 
** [[pantograph]]-[[aragem]]
 
* [[Ec-25_000020]]
 
** [[pantograph]]-[[aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-5652]], 2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5652 PWY-5652]
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY66-425]], L-lysine degradation II (L-pipecolate pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-425 PWY66-425]
 
** '''3''' reactions found over '''8''' reactions in the full pathway
 
* [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-DEG1-PWY LYSINE-DEG1-PWY]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[manual]]
** [[pantograph]]:
+
** Source: [[manual-import_from_medium]]
*** [[aragem]]
+
*** Comment: [[added to manage seeds from boundary to extracellular compartment]]
* [[annotation]]:
+
** [[pathwaytools]]:
+
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: direction=REVERSIBLE}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30795 30795]
+
{{#set: in pathway=}}
* LIGAND-RXN:
+
{{#set: reconstruction category=manual}}
** [http://www.genome.jp/dbget-bin/www_bget?R01933 R01933]
+
{{#set: reconstruction source=manual-import_from_medium}}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: gene associated=Ec-27_004160|Ec-25_000020}}
+
{{#set: in pathway=PWY-5652|PWY66-425|LYSINE-DEG1-PWY}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=aragem}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 20:42, 21 March 2018

Reaction ExchangeSeed_NITRATE

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 nitrate[C-BOUNDARY] <=> 1.0 nitrate[e]

Genes associated with this reaction

Pathways

Reconstruction information

External links