Difference between revisions of "GLUTAMATE-SYNTHASE-FERREDOXIN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-182 CPD-182] == * smiles: ** CC1(=CC(OC2(C=C(O)C=CC1=2))=O) * inchi key: ** InChIKey=HSHNIT...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-FERREDOXIN-RXN GLUTAMATE-SYNTHASE-FERREDOXIN-RXN] == * direction: ** LEFT-TO-RIG...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-182 CPD-182] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-FERREDOXIN-RXN GLUTAMATE-SYNTHASE-FERREDOXIN-RXN] ==
−
* smiles:
+
* direction:
−
** CC1(=CC(OC2(C=C(O)C=CC1=2))=O)
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=HSHNITRMYYLLCV-UHFFFAOYSA-N
+
 
* common name:
 
* common name:
−
** 4-methylumbelliferone
+
** Glutamate synthase (ferredoxin-dependent)
−
* molecular weight:
+
** Aldolase-type TIM barrel
−
** 176.171   
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.4.7.1 EC-1.4.7.1]
 
* Synonym(s):
 
* Synonym(s):
−
** Hymecromone
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[RXN-10769]]
+
** 2 [[PROTON]][c] '''+''' 1 [[GLN]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 2 [[GLT]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 2 H+[c] '''+''' 1 L-glutamine[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 2 L-glutamate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-00_000720]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-26_004630]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-27_004970]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 +
== Pathways  ==
 +
* [[PWY-6964]], ammonia assimilation cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6964 PWY-6964]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-4341]], L-glutamate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4341 PWY-4341]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* CAS : 90-33-5
+
* LIGAND-RXN:
−
* DRUGBANK : DB07118
+
** [http://www.genome.jp/dbget-bin/www_bget?R00021 R00021]
−
* PUBCHEM:
+
* UNIPROT:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5280567 5280567]
+
** [http://www.uniprot.org/uniprot/P23225 P23225]
−
* HMDB : HMDB59622
+
** [http://www.uniprot.org/uniprot/O67512 O67512]
−
* LIGAND-CPD:
+
** [http://www.uniprot.org/uniprot/P96218 P96218]
−
** [http://www.genome.jp/dbget-bin/www_bget?C03081 C03081]
+
** [http://www.uniprot.org/uniprot/Q06434 Q06434]
−
* CHEMSPIDER:
+
** [http://www.uniprot.org/uniprot/Q43081 Q43081]
−
** [http://www.chemspider.com/Chemical-Structure.4444190.html 4444190]
+
** [http://www.uniprot.org/uniprot/P55037 P55037]
−
* CHEBI:
+
** [http://www.uniprot.org/uniprot/Q43155 Q43155]
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17224 17224]
+
** [http://www.uniprot.org/uniprot/Q7M242 Q7M242]
−
* METABOLIGHTS : MTBLC17224
+
** [http://www.uniprot.org/uniprot/P51375 P51375]
−
{{#set: smiles=CC1(=CC(OC2(C=C(O)C=CC1=2))=O)}}
+
** [http://www.uniprot.org/uniprot/P55038 P55038]
−
{{#set: inchi key=InChIKey=HSHNITRMYYLLCV-UHFFFAOYSA-N}}
+
** [http://www.uniprot.org/uniprot/Q9SLM4 Q9SLM4]
−
{{#set: common name=4-methylumbelliferone}}
+
** [http://www.uniprot.org/uniprot/Q08258 Q08258]
−
{{#set: molecular weight=176.171    }}
+
** [http://www.uniprot.org/uniprot/O49154 O49154]
−
{{#set: common name=Hymecromone}}
+
** [http://www.uniprot.org/uniprot/O19906 O19906]
−
{{#set: produced by=RXN-10769}}
+
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Glutamate synthase (ferredoxin-dependent)}}
 +
{{#set: common name=Aldolase-type TIM barrel}}
 +
{{#set: ec number=EC-1.4.7.1}}
 +
{{#set: gene associated=Ec-00_000720|Ec-26_004630|Ec-27_004970}}
 +
{{#set: in pathway=PWY-6964|PWY-4341|PWY-6549}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:53, 21 March 2018

Reaction GLUTAMATE-SYNTHASE-FERREDOXIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glutamate synthase (ferredoxin-dependent)
    • Aldolase-type TIM barrel
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6964, ammonia assimilation cycle II: PWY-6964
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-4341, L-glutamate biosynthesis V: PWY-4341
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6549, L-glutamine biosynthesis III: PWY-6549
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=GLUTAMATE-SYNTHASE-FERREDOXIN-RXN&oldid=30078"