Difference between revisions of "HEME-BIOSYNTHESIS-II"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5055 RXN0-5055] == * direction: ** LEFT-TO-RIGHT * common name: ** Acetyl-CoA carboxylase, par...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAG...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5055 RXN0-5055] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
−
** Acetyl-CoA carboxylase, partial
+
** heme biosynthesis I (aerobic)
−
** acetyl-CoA carboxylase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/6.4.1.2 EC-6.4.1.2]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''4''' reactions found over '''4''' reactions in the full pathway
−
** 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[Carboxybiotin-BCCP]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[BCCP-dimers]][c] '''+''' 1 [[PROTON]][c]
+
* [[PROTOHEMEFERROCHELAT-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 H2O[c] '''+''' 1 ATP[c] '''+''' 1 a carboxylated-biotinylated [BCCP dimer][c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 phosphate[c] '''+''' 1 malonyl-CoA[c] '''+''' 1 ADP[c] '''+''' 1 a biotinylated [BCCP dimer][c] '''+''' 1 H+[c]
+
*** [[Ec-01_005360]]
−
 
+
** 2 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[annotation-esiliculosus_genome]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-aragem]]
−
* Gene: [[Ec-19_003230]]
+
* [[PROTOPORGENOXI-RXN]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** 1 associated gene(s):
−
*** Assignment: EC-NUMBER
+
*** [[Ec-25_003100]]
−
* Gene: [[Ec-19_003040]]
+
** 2 reconstruction source(s) associated:
−
** Source: [[annotation-esiliculosus_genome]]
+
*** [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
*** [[orthology-aragem]]
−
* Gene: [[Ec-20_002520]]
+
* [[RXN0-1461]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** 2 associated gene(s):
−
*** Assignment: EC-NUMBER
+
*** [[Ec-08_001470]]
−
== Pathways  ==
+
*** [[Ec-19_005390]]
−
* [[PWY0-1264]], biotin-carboxyl carrier protein assembly: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1264 PWY0-1264]
+
** 2 reconstruction source(s) associated:
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
*** [[annotation-esiliculosus_genome]]
−
== Reconstruction information  ==
+
*** [[orthology-aragem]]
−
* Category: [[annotation]]
+
* [[UROGENDECARBOX-RXN]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** 3 associated gene(s):
−
*** Tool: [[pathwaytools]]
+
*** [[Ec-24_000620]]
 +
*** [[Ec-01_000360]]
 +
*** [[Ec-24_000650]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* ECOCYC:
−
{{#set: common name=Acetyl-CoA carboxylase, partial}}
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II]
−
{{#set: common name=acetyl-CoA carboxylase}}
+
* SGD-PATHWAY : HEME-BIOSYNTHESIS-II
−
{{#set: ec number=EC-6.4.1.2}}
+
* PLASMOCYC : HEME-BIOSYNTHESIS-II
−
{{#set: gene associated=Ec-19_003230|Ec-19_003040|Ec-20_002520}}
+
* HUMANCYC : HEME-BIOSYNTHESIS-II
−
{{#set: in pathway=PWY0-1264}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: taxonomic range=TAX-2759}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: common name=heme biosynthesis I (aerobic)}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reaction found=4}}
 +
{{#set: total reaction=4}}
 +
{{#set: completion rate=100.0}}

Latest revision as of 20:29, 21 March 2018

Pathway HEME-BIOSYNTHESIS-II

  • taxonomic range:
  • common name:
    • heme biosynthesis I (aerobic)
  • Synonym(s):

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

  • ECOCYC:
  • SGD-PATHWAY : HEME-BIOSYNTHESIS-II
  • PLASMOCYC : HEME-BIOSYNTHESIS-II
  • HUMANCYC : HEME-BIOSYNTHESIS-II




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=HEME-BIOSYNTHESIS-II&oldid=27236"