Difference between revisions of "HOMOSER-THRESYN-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6480 RXN0-6480] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonuclease P ** Ribonucle...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-THRESYN-PWY HOMOSER-THRESYN-PWY] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6480 RXN0-6480] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
+
 
* common name:
 
* common name:
−
** L-threonine biosynthesis
+
** ribonuclease P
 +
** Ribonuclease P, Rpp40
 +
** RNAse P, Rpr2/Rpp21 subunit
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.26.5 EC-3.1.26.5]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
  '''2''' reactions found over '''2''' reactions in the full pathway
+
* With identifiers:
−
* [[HOMOSERKIN-RXN]]
+
** 1 [[CPD0-2354]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[tRNAs]][c] '''+''' 1 [[tRNA-fragment]][c]
−
* [[THRESYN-RXN]]
+
* With common name(s):
−
== Reaction(s) not found ==
+
** 1 a tRNA precursor with a 5' extension[c] '''+''' 1 H2O[c] '''=>''' 1 an uncharged tRNA[c] '''+''' 1 a tRNA fragment[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Ec-03_005340]]
 +
** ESILICULOSUS_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
* [[Ec-01_005810]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-04_004570]]
 +
** ESILICULOSUS_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
* [[Ec-22_001370]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
== Pathways ==
 +
* [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=HOMOSER-THRESYN-PWY HOMOSER-THRESYN-PWY]
+
{{#set: common name=ribonuclease P}}
−
{{#set: taxonomic range=TAX-2157}}
+
{{#set: common name=Ribonuclease P, Rpp40}}
−
{{#set: taxonomic range=TAX-4751}}
+
{{#set: common name=RNAse P, Rpr2/Rpp21 subunit}}
−
{{#set: taxonomic range=TAX-2}}
+
{{#set: ec number=EC-3.1.26.5}}
−
{{#set: taxonomic range=TAX-33090}}
+
{{#set: gene associated=Ec-03_005340|Ec-01_005810|Ec-04_004570|Ec-22_001370}}
−
{{#set: common name=L-threonine biosynthesis}}
+
{{#set: in pathway=PWY0-1479}}
−
{{#set: reaction found=2}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reaction not found=2}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: completion rate=100.0}}
+
{{#set: reconstruction tool=pathwaytools}}

Revision as of 22:10, 17 March 2018

Reaction RXN0-6480

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ribonuclease P
    • Ribonuclease P, Rpp40
    • RNAse P, Rpr2/Rpp21 subunit
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a tRNA precursor with a 5' extension[c] + 1 H2O[c] => 1 an uncharged tRNA[c] + 1 a tRNA fragment[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1479, tRNA processing: PWY0-1479
    • 2 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=HOMOSER-THRESYN-PWY&oldid=11941"