Difference between revisions of "HOMOSER-THRESYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6480 RXN0-6480] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonuclease P ** Ribonucle...")
(Created page with "Category:Gene == Gene Ec-08_005770 == * left end position: ** 5516161 * transcription direction: ** POSITIVE * right end position: ** 5524152 * centisome position: ** 82.3...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6480 RXN0-6480] ==
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== Gene Ec-08_005770 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5516161
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* common name:
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* transcription direction:
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** ribonuclease P
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** POSITIVE
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** Ribonuclease P, Rpp40
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* right end position:
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** RNAse P, Rpr2/Rpp21 subunit
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** 5524152
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/3.1.26.5 EC-3.1.26.5]
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** 82.36683   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0005_0217
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** Esi0005_0217
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** PK
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROTEIN-KINASE-RXN]]
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** 1 [[CPD0-2354]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[tRNAs]][c] '''+''' 1 [[tRNA-fragment]][c]
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* With common name(s):
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** 1 a tRNA precursor with a 5' extension[c] '''+''' 1 H2O[c] '''=>''' 1 an uncharged tRNA[c] '''+''' 1 a tRNA fragment[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-03_005340]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-01_005810]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-04_004570]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-22_001370]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=5516161}}
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{{#set: common name=ribonuclease P}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Ribonuclease P, Rpp40}}
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{{#set: right end position=5524152}}
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{{#set: common name=RNAse P, Rpr2/Rpp21 subunit}}
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{{#set: centisome position=82.36683    }}
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{{#set: ec number=EC-3.1.26.5}}
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{{#set: common name=Esi_0005_0217|Esi0005_0217|PK}}
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{{#set: gene associated=Ec-03_005340|Ec-01_005810|Ec-04_004570|Ec-22_001370}}
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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{{#set: in pathway=PWY0-1479}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:32, 21 March 2018

Gene Ec-08_005770

  • left end position:
    • 5516161
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5524152
  • centisome position:
    • 82.36683
  • Synonym(s):
    • Esi_0005_0217
    • Esi0005_0217
    • PK

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=HOMOSER-THRESYN-PWY&oldid=19448"