Difference between revisions of "Manual"

From metabolic_network
Jump to: navigation, search
(Created page with "{{#ask: Category:Reaction reconstruction source::aragem | ?COMMON NAME | ?ec number | ?reconstruction category | ?reconstruction tool | ?reconstruction source | ?gene...")
 
(Created page with "{{#ask: Category:Reaction reconstruction category::manual | ?common name | ?ec number | ?reconstruction category | ?reconstruction tool | ?reconstruction source | ?rec...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
{{#ask: [[Category:Reaction]] [[reconstruction source::aragem]]
+
{{#ask: [[Category:Reaction]] [[reconstruction category::manual]]
−
| ?COMMON NAME
+
| ?common name
 
| ?ec number
 
| ?ec number
 
| ?reconstruction category
 
| ?reconstruction category
 
| ?reconstruction tool
 
| ?reconstruction tool
 
| ?reconstruction source
 
| ?reconstruction source
 +
| ?reconstruction comment
 
| ?gene associated
 
| ?gene associated
 
| ?in pathway
 
| ?in pathway
 
}}
 
}}

Latest revision as of 21:02, 21 March 2018

 Common nameEc numberReconstruction categoryReconstruction toolReconstruction sourceReconstruction commentGene associatedIn pathway
Biomass rxnManualManual-2 biomass rxnForfbaNone
Exchange BIOMASSManualManual-2 biomass rxnExchange biomass to boundary
ExchangeSeed ADENOSYLCOBALAMINManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed AMMONIAManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed BIOTINManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed CA+2ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed CARBON-DIOXIDEManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed CL-ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed CO+2ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed COB-I-ALAMINManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed CPD-3ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed CPD-315ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed CU+ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed CU+2ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed EDTAManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed FE+2ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed FE+3ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed K+ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed LightManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed MG+2ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed MN+2ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed NA+ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed NITRATEManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed OXYGEN-MOLECULEManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed PROTONManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed SULFATEManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed THIAMINEManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed WATERManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed ZN+2ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
R07063ManualManual-1 keggrxns to addReaction from kegg for the production of cpd-8117 (gamma-linolenate)
R07861ManualManual-1 keggrxns to addReaction from kegg for the production of cpd-12653 (stearidonate)
R08184ManualManual-1 keggrxns to addReaction from kegg for the production of docosanoate
R08190ManualManual-1 keggrxns to addReaction from kegg for the production of eicosadienoates
RXN-14146EC-4.1.2ManualManual-2 cycrxns to addReaction added for curationEc-11 002460
RXN-1501 METACYC18.5ManualManual-1 cycrxns to addReaction from metacyc 18.5 to produce linolenic acid. reaction phospholipase-a2-rxn deleted in return because implies linolenic acid compound class onlyEc-21 005150
Ec-04 004650
RXN-15490ManualManual-2 lightrxns to addExchange reaction for light
RXN-8349 PLANTCYCManualManual-1 cycrxns to addReaction from plantcyc20.5
Transport BIOMASSManualManual-2 biomass rxnTransport biomass to external compartment
TransportSeed ADENOSYLCOBALAMINManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed AMMONIAManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed BIOTINManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed CA+2ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed CARBON-DIOXIDEManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed CL-ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed CO+2ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed COB-I-ALAMINManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed CPD-3ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed CPD-315ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed CU+ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed CU+2ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
... further results
Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Manual&oldid=31103"