Difference between revisions of "OHACYL-COA-DEHYDROG-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTP-CYCLOHYDRO-I-RXN GTP-CYCLOHYDRO-I-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** GTP c...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHACYL-COA-DEHYDROG-RXN OHACYL-COA-DEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTP-CYCLOHYDRO-I-RXN GTP-CYCLOHYDRO-I-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHACYL-COA-DEHYDROG-RXN OHACYL-COA-DEHYDROG-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** GTP cyclohydrolase I
+
** 3-hydroxyacyl-CoA dehydrogenase
 +
** 6-phosphogluconate dehydrogenase, C-terminal-like
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.4.16 EC-3.5.4.16]
+
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DIHYDRONEOPTERIN-P3]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[FORMATE]][c]
+
** 1 [[L-3-HYDROXYACYL-COA]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 GTP[c] '''+''' 1 H2O[c] '''=>''' 1 7,8-dihydroneopterin 3'-triphosphate[c] '''+''' 1 H+[c] '''+''' 1 formate[c]
+
** 1 a (3S)-3-hydroxyacyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 a 3-oxoacyl-CoA[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-27_007000]]
+
* Gene: [[Ec-14_006530]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
 +
* Gene: [[Ec-19_005290]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5663]], tetrahydrobiopterin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5663 PWY-5663]
+
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY0-1433]], tetrahydromonapterin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1433 PWY0-1433]
+
* [[PWY-7007]], methyl ketone biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7007 PWY-7007]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7442]], drosopterin and aurodrosopterin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7442 PWY-7442]
+
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6983]], tetrahydrobiopterin biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6983 PWY-6983]
+
* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5664]], tetrahydrobiopterin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5664 PWY-5664]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-6703]], preQ0 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6703 PWY-6703]
+
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 41: Line 39:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17473 17473]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22432 22432]
 +
* PIR:
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A39592 A39592]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A49613 A49613]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A55045 A55045]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DEPGC DEPGC]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DWRTEP DWRTEP]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4210 JC4210]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4879 JC4879]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0199 JX0199]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S32607 S32607]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36678 S36678]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S40743 S40743]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S54786 S54786]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57651 S57651]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S74114 S74114]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T10464 T10464]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T46866 T46866]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00424 R00424]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01778 R01778]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P19465 P19465]
+
** [http://www.uniprot.org/uniprot/P21177 P21177]
−
** [http://www.uniprot.org/uniprot/P22288 P22288]
+
** [http://www.uniprot.org/uniprot/Q08426 Q08426]
−
** [http://www.uniprot.org/uniprot/P43866 P43866]
+
** [http://www.uniprot.org/uniprot/Q53924 Q53924]
−
** [http://www.uniprot.org/uniprot/P51594 P51594]
+
** [http://www.uniprot.org/uniprot/P07896 P07896]
−
** [http://www.uniprot.org/uniprot/P64207 P64207]
+
** [http://www.uniprot.org/uniprot/Q61425 Q61425]
−
** [http://www.uniprot.org/uniprot/Q9CGE3 Q9CGE3]
+
** [http://www.uniprot.org/uniprot/Q16836 Q16836]
−
** [http://www.uniprot.org/uniprot/O66603 O66603]
+
** [http://www.uniprot.org/uniprot/P28793 P28793]
−
** [http://www.uniprot.org/uniprot/P56462 P56462]
+
** [http://www.uniprot.org/uniprot/P22414 P22414]
−
** [http://www.uniprot.org/uniprot/P0A6T5 P0A6T5]
+
** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
−
** [http://www.uniprot.org/uniprot/P50141 P50141]
+
** [http://www.uniprot.org/uniprot/P34439 P34439]
−
** [http://www.uniprot.org/uniprot/P30793 P30793]
+
** [http://www.uniprot.org/uniprot/Q01373 Q01373]
−
** [http://www.uniprot.org/uniprot/P51601 P51601]
+
** [http://www.uniprot.org/uniprot/P55100 P55100]
−
** [http://www.uniprot.org/uniprot/Q05915 Q05915]
+
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
−
** [http://www.uniprot.org/uniprot/P51597 P51597]
+
** [http://www.uniprot.org/uniprot/P00348 P00348]
−
** [http://www.uniprot.org/uniprot/P51600 P51600]
+
−
** [http://www.uniprot.org/uniprot/Q94465 Q94465]
+
−
** [http://www.uniprot.org/uniprot/Q55759 Q55759]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=GTP cyclohydrolase I}}
+
{{#set: common name=3-hydroxyacyl-CoA dehydrogenase}}
−
{{#set: ec number=EC-3.5.4.16}}
+
{{#set: common name=6-phosphogluconate dehydrogenase, C-terminal-like}}
−
{{#set: gene associated=Ec-27_007000}}
+
{{#set: ec number=EC-1.1.1.35}}
−
{{#set: in pathway=PWY-5663|PWY0-1433|PWY-7442|PWY-6983|PWY-5664|PWY-6703|PWY-6147}}
+
{{#set: gene associated=Ec-14_006530|Ec-19_005290}}
 +
{{#set: in pathway=PWY-5136|PWY-7007|FAO-PWY|PWY66-391}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:06, 21 March 2018

Reaction OHACYL-COA-DEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-hydroxyacyl-CoA dehydrogenase
    • 6-phosphogluconate dehydrogenase, C-terminal-like
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5136, fatty acid β-oxidation II (peroxisome): PWY-5136
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7007, methyl ketone biosynthesis (engineered): PWY-7007
    • 3 reactions found over 6 reactions in the full pathway
  • FAO-PWY, fatty acid β-oxidation I: FAO-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY66-391, fatty acid β-oxidation VI (peroxisome): PWY66-391
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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