Difference between revisions of "P185-PWY"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5651 PWY-5651] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] **...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5651 PWY-5651] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
 
 
* common name:
 
* common name:
−
** L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
+
** formaldehyde assimilation III (dihydroxyacetone cycle)
 
* Synonym(s):
 
* Synonym(s):
 +
** dihydroxyacetone cycle
 +
** xylulose-monophosphate cycle
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''2''' reactions found over '''5''' reactions in the full pathway
+
  '''11''' reactions found over '''12''' reactions in the full pathway
−
* [[KYNURENINE-3-MONOOXYGENASE-RXN]]
+
* [[1TRANSKETO-RXN]]
−
** 3 associated gene(s):
+
** 1 associated gene(s):
−
*** [[Ec-26_002430]]
+
*** [[Ec-20_002600]]
−
*** [[Ec-26_001830]]
+
** 2 reconstruction source(s) associated:
−
*** [[Ec-28_001680]]
+
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[2TRANSKETO-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-20_002600]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[F16ALDOLASE-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Ec-10_004980]]
 +
*** [[Ec-01_008040]]
 +
*** [[Ec-10_000880]]
 +
*** [[Ec-14_001680]]
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
* [[RXN-8665]]
+
* [[F16BDEPHOS-RXN]]
 +
** 7 associated gene(s):
 +
*** [[Ec-06_004200]]
 +
*** [[Ec-04_004710]]
 +
*** [[Ec-17_003090]]
 +
*** [[Ec-12_004070]]
 +
*** [[Ec-14_005760]]
 +
*** [[Ec-22_000360]]
 +
*** [[Ec-21_001790]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[GAPOXNPHOSPHN-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Ec-25_003550]]
 +
*** [[Ec-19_001850]]
 +
*** [[Ec-19_003020]]
 +
*** [[Ec-08_000500]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[GLYCERONE-KINASE-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Ec-20_001720]]
+
*** [[Ec-18_002130]]
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
 +
* [[PHOSGLYPHOS-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Ec-12_004530]]
 +
*** [[Ec-21_005710]]
 +
*** [[Ec-21_004220]]
 +
*** [[Ec-08_002400]]
 +
*** [[Ec-12_004550]]
 +
*** [[Ec-01_001350]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[RIB5PISOM-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-08_003540]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[RIBULP3EPIM-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Ec-07_002390]]
 +
*** [[Ec-27_003930]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[TRANSALDOL-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Ec-06_003940]]
 +
*** [[Ec-01_002780]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[TRIOSEPISOMERIZATION-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Ec-08_000500]]
 +
*** [[Ec-24_000360]]
 +
*** [[Ec-03_002790]]
 +
*** [[Ec-23_004160]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=1.13.11.6-RXN 1.13.11.6-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=FORMALDEHYDE-TRANSKETOLASE-RXN FORMALDEHYDE-TRANSKETOLASE-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-KYNURENINASE-RXN 3-HYDROXY-KYNURENINASE-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=ARYLFORMAMIDASE-RXN ARYLFORMAMIDASE-RXN]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2}}
 
 
{{#set: taxonomic range=TAX-4751}}
 
{{#set: taxonomic range=TAX-4751}}
−
{{#set: taxonomic range=TAX-33208}}
+
{{#set: common name=formaldehyde assimilation III (dihydroxyacetone cycle)}}
−
{{#set: common name=L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde}}
+
{{#set: common name=dihydroxyacetone cycle|xylulose-monophosphate cycle}}
−
{{#set: reaction found=2}}
+
{{#set: reaction found=11}}
−
{{#set: total reaction=5}}
+
{{#set: total reaction=12}}
−
{{#set: completion rate=40.0}}
+
{{#set: completion rate=92.0}}

Latest revision as of 20:13, 21 March 2018

Pathway P185-PWY

  • taxonomic range:
  • common name:
    • formaldehyde assimilation III (dihydroxyacetone cycle)
  • Synonym(s):
    • dihydroxyacetone cycle
    • xylulose-monophosphate cycle

Reaction(s) found

11 reactions found over 12 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=P185-PWY&oldid=25445"