Difference between revisions of "PORPHOBILSYNTH-RXN"

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(Created page with "Category:Gene == Gene Ec-20_002530 == * left end position: ** 2563602 * transcription direction: ** NEGATIVE * right end position: ** 2570128 * centisome position: ** 49.7...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PORPHOBILSYNTH-RXN PORPHOBILSYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** porphobil...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-20_002530 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PORPHOBILSYNTH-RXN PORPHOBILSYNTH-RXN] ==
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* left end position:
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* direction:
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** 2563602
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** porphobilinogen synthase, putative chloroplast precursor
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* right end position:
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* ec number:
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** 2570128
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** [http://enzyme.expasy.org/EC/4.2.1.24 EC-4.2.1.24]
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* centisome position:
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** 49.716694   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0198_0009
 
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** Esi0198_0009
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[2.4.1.46-RXN]]
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* With identifiers:
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** 2 [[5-AMINO-LEVULINATE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PORPHOBILINOGEN]][c] '''+''' 2 [[WATER]][c]
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* With common name(s):
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** 2 5-aminolevulinate[c] '''=>''' 1 H+[c] '''+''' 1 porphobilinogen[c] '''+''' 2 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-00_001750]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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* Reaction: [[RXN-16027]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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* [[PWY-401]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=2563602}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24064 24064]
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{{#set: right end position=2570128}}
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* LIGAND-RXN:
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{{#set: centisome position=49.716694    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00036 R00036]
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{{#set: common name=Esi_0198_0009|Esi0198_0009}}
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* UNIPROT:
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{{#set: reaction associated=2.4.1.46-RXN|RXN-16027}}
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** [http://www.uniprot.org/uniprot/P06214 P06214]
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{{#set: pathway associated=PWY-401}}
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** [http://www.uniprot.org/uniprot/P13716 P13716]
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** [http://www.uniprot.org/uniprot/Q7M315 Q7M315]
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** [http://www.uniprot.org/uniprot/P30124 P30124]
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** [http://www.uniprot.org/uniprot/Q9JV37 Q9JV37]
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** [http://www.uniprot.org/uniprot/P30950 P30950]
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** [http://www.uniprot.org/uniprot/Q60178 Q60178]
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** [http://www.uniprot.org/uniprot/Q9PNU5 Q9PNU5]
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** [http://www.uniprot.org/uniprot/Q59295 Q59295]
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** [http://www.uniprot.org/uniprot/Q02250 Q02250]
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** [http://www.uniprot.org/uniprot/P10518 P10518]
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** [http://www.uniprot.org/uniprot/Q43148 Q43148]
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** [http://www.uniprot.org/uniprot/Q42682 Q42682]
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** [http://www.uniprot.org/uniprot/Q43058 Q43058]
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** [http://www.uniprot.org/uniprot/Q59643 Q59643]
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** [http://www.uniprot.org/uniprot/Q9S8B1 Q9S8B1]
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** [http://www.uniprot.org/uniprot/P05373 P05373]
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** [http://www.uniprot.org/uniprot/P0ACB2 P0ACB2]
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** [http://www.uniprot.org/uniprot/Q42836 Q42836]
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** [http://www.uniprot.org/uniprot/P43210 P43210]
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** [http://www.uniprot.org/uniprot/Q9ZNC9 Q9ZNC9]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=porphobilinogen synthase, putative chloroplast precursor}}
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{{#set: ec number=EC-4.2.1.24}}
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{{#set: gene associated=Ec-00_001750}}
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{{#set: in pathway=PWY-5189|PWY-5188}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:41, 21 March 2018

Reaction PORPHOBILSYNTH-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • porphobilinogen synthase, putative chloroplast precursor
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5189, tetrapyrrole biosynthesis II (from glycine): PWY-5189
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5188, tetrapyrrole biosynthesis I (from glutamate): PWY-5188
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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