Difference between revisions of "PPGPPMET-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7421 RXN-7421] == * direction: ** LEFT-TO-RIGHT * common name: ** cyclopropane-fatty-acyl-phosp...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 T...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7421 RXN-7421] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** cyclopropane-fatty-acyl-phospholipid synthase
+
** ppGpp biosynthesis
* ec number:
+
** [http://enzyme.expasy.org/EC/2.1.1.79 EC-2.1.1.79]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** guanosine 3'-diphosphate 5'-diphosphate biosynthesis
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''3''' reactions found over '''6''' reactions in the full pathway
** 1 [[Oleoyl-lipid]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Lipid-dihydrosterculate]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
+
* [[GDPKIN-RXN]]
* With common name(s):
+
** 7 associated gene(s):
** 1 a [glycerolipid]-oleate[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 a [glycerolipid]-dihydrosterculate[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
+
*** [[Ec-11_005170]]
 
+
*** [[Ec-03_001380]]
== Genes associated with this reaction  ==
+
*** [[Ec-22_003280]]
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Ec-11_004330]]
* [[Ec-28_001010]]
+
*** [[Ec-26_003930]]
** ESILICULOSUS_GENOME
+
*** [[Ec-07_000140]]
***GO-TERM
+
*** [[Ec-04_001140]]
== Pathways  ==
+
** 2 reconstruction source(s) associated:
* [[PWY-4942]], sterculate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4942 PWY-4942]
+
*** [[annotation-esiliculosus_genome]]
** '''1''' reactions found over '''2''' reactions in the full pathway
+
*** [[orthology-aragem]]
== Reconstruction information  ==
+
* [[GDPPYPHOSKIN-RXN]]
* Category: [[annotation]]
+
** 1 associated gene(s):
** Source: [[annotation-esiliculosus_genome]]
+
*** [[Ec-12_008850]]
*** Tool: [[pathwaytools]]
+
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
* [[GTPPYPHOSKIN-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-12_008850]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PPGPPSYN-RXN PPGPPSYN-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PPPGPPHYDRO-RXN PPPGPPHYDRO-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6427 RXN0-6427]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
* ECOCYC:
{{#set: common name=cyclopropane-fatty-acyl-phospholipid synthase}}
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY]
{{#set: ec number=EC-2.1.1.79}}
+
{{#set: taxonomic range=TAX-2}}
{{#set: gene associated=Ec-28_001010}}
+
{{#set: common name=ppGpp biosynthesis}}
{{#set: in pathway=PWY-4942}}
+
{{#set: common name=guanosine 3'-diphosphate 5'-diphosphate biosynthesis}}
{{#set: reconstruction category=annotation}}
+
{{#set: reaction found=3}}
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: total reaction=6}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: completion rate=50.0}}

Latest revision as of 20:17, 21 March 2018

Pathway PPGPPMET-PWY

  • taxonomic range:
  • common name:
    • ppGpp biosynthesis
  • Synonym(s):
    • guanosine 3'-diphosphate 5'-diphosphate biosynthesis

Reaction(s) found

3 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links