Difference between revisions of "PREPHENATE-TRANSAMINE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4821 RXN-4821] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/3.5.9...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATE-TRANSAMINE-RXN PREPHENATE-TRANSAMINE-RXN] == * direction: ** REVERSIBLE * ec number: **...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4821 RXN-4821] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATE-TRANSAMINE-RXN PREPHENATE-TRANSAMINE-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.99 EC-3.5.99]
+
** [http://enzyme.expasy.org/EC/2.6.1.79 EC-2.6.1.79]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[L-ALPHA-AMINO-EPSILON-KETO-PIMELATE]][c]
+
** 1 [[CPD-659]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[PREPHENATE]][c] '''+''' 1 [[GLT]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (S)-2,3,4,5-tetrahydrodipicolinate[c] '''+''' 1 H+[c] '''+''' 1 H2O[c] '''<=>''' 1 L-&alpha;-amino-&epsilon;-keto-pimelate[c]
+
** 1 L-arogenate[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 prephenate[c] '''+''' 1 L-glutamate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
+
* [[PWY-6120]], L-tyrosine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6120 PWY-6120]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3462]], L-phenylalanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3462 PWY-3462]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3461]], L-tyrosine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3461 PWY-3461]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[gap-filling]]
−
** [[pathwaytools]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24797 24797]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22880 22880]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04336 R04336]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07276 R07276]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-3.5.99}}
+
{{#set: ec number=EC-2.6.1.79}}
−
{{#set: in pathway=PWY-2942}}
+
{{#set: in pathway=PWY-6120|PWY-3462|PWY-3461}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 20:07, 21 March 2018

Reaction PREPHENATE-TRANSAMINE-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-arogenate[c] + 1 2-oxoglutarate[c] <=> 1 prephenate[c] + 1 L-glutamate[c]

Genes associated with this reaction

Pathways

  • PWY-6120, L-tyrosine biosynthesis III: PWY-6120
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-3462, L-phenylalanine biosynthesis II: PWY-3462
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3461, L-tyrosine biosynthesis II: PWY-3461
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




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