Difference between revisions of "PREPHENATEDEHYDROG-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATEDEHYDROG-RXN PREPHENATEDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [ht...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATEDEHYDROG-RXN PREPHENATEDEHYDROG-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** methylerythritol phosphate pathway I
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** [http://enzyme.expasy.org/EC/1.3.1.12 EC-1.3.1.12]
 
* Synonym(s):
 
* Synonym(s):
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** nonmevalonate isopentenyl diphosphate biosynthesis
 
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** methylerythritol phosphate degradation
 
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** MEP degradation
 
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** deoxyxylulose phosphate pathway
 
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** DOXP pathway
 
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** Rohmer pathway
 
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** isopentenyl diphosphate biosynthesis -- mevalonate-independent
 
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** nonmevalonate isoprenoid pathway
 
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** MEP pathway
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''8''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[2.7.1.148-RXN]]
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** 1 [[PREPHENATE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[P-HYDROXY-PHENYLPYRUVATE]][c]
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* [[2.7.7.60-RXN]]
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* With common name(s):
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* [[DXPREDISOM-RXN]]
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** 1 prephenate[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 CO2[c] '''+''' 1 4-hydroxyphenylpyruvate[c]
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* [[DXS-RXN]]
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* [[IPPISOM-RXN]]
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== Genes associated with this reaction  ==
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* [[ISPH2-RXN]]
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== Pathways  ==
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* [[RXN0-302]]
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* [[PWY-7303]], 3-dimethylallyl-4-hydroxybenzoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7303 PWY-7303]
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* [[RXN0-884]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reaction(s) not found ==
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* [[TYRSYN]], L-tyrosine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TYRSYN TYRSYN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15878 RXN-15878]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[gap-filling]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** Tool: [[meneco]]
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**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13869 13869]
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* ARACYC:
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* LIGAND-RXN:
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** [http://metacyc.org/ARA/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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** [http://www.genome.jp/dbget-bin/www_bget?R01728 R01728]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=methylerythritol phosphate pathway I}}
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** [http://www.uniprot.org/uniprot/Q9CET9 Q9CET9]
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{{#set: common name=nonmevalonate isopentenyl diphosphate biosynthesis|methylerythritol phosphate degradation|MEP degradation|deoxyxylulose phosphate pathway|DOXP pathway|Rohmer pathway|isopentenyl diphosphate biosynthesis -- mevalonate-independent|nonmevalonate isoprenoid pathway|MEP pathway}}
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** [http://www.uniprot.org/uniprot/Q9PIZ7 Q9PIZ7]
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{{#set: reaction found=8}}
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** [http://www.uniprot.org/uniprot/P43902 P43902]
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{{#set: reaction not found=9}}
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** [http://www.uniprot.org/uniprot/P07023 P07023]
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{{#set: completion rate=89.0}}
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** [http://www.uniprot.org/uniprot/Q04983 Q04983]
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** [http://www.uniprot.org/uniprot/Q02287 Q02287]
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** [http://www.uniprot.org/uniprot/P43901 P43901]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.3.1.12}}
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{{#set: in pathway=PWY-7303|TYRSYN}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 20:22, 21 March 2018

Reaction PREPHENATEDEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7303, 3-dimethylallyl-4-hydroxybenzoate biosynthesis: PWY-7303
    • 1 reactions found over 4 reactions in the full pathway
  • TYRSYN, L-tyrosine biosynthesis I: TYRSYN
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




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