Difference between revisions of "PWY-1042"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13908 RXN-13908] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-alpha-hydroxytetrahydrobi...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13908 RXN-13908] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** 4-alpha-hydroxytetrahydrobiopterin dehydratase
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** glycolysis IV (plant cytosol)
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.96 EC-4.2.1.96]
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* Synonym(s):
 
* Synonym(s):
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** glycolysis 4
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''8''' reactions found over '''10''' reactions in the full pathway
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** 1 [[CPD-14931]][c] '''=>''' 1 [[10-FORMYL-DIHYDROFOLATE-GLU-N]][c] '''+''' 1 [[WATER]][c]
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* [[2PGADEHYDRAT-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 a 10-formyltetrahydrofolate-4a-carbinolamine[c] '''=>''' 1 a 10-formyldihydrofolate[c] '''+''' 1 H2O[c]
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*** [[Ec-14_005400]]
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*** [[Ec-27_004000]]
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== Genes associated with this reaction  ==
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*** [[Ec-26_004120]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* [[Ec-12_001420]]
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*** [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** [[orthology-aragem]]
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***GO-TERM
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* [[3PGAREARR-RXN]]
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== Pathways  ==
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** 7 associated gene(s):
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* [[PWY-7158]], L-phenylalanine degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7158 PWY-7158]
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*** [[Ec-27_000330]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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*** [[Ec-24_002670]]
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== Reconstruction information  ==
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*** [[Ec-10_005410]]
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* Category: [[annotation]]
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*** [[Ec-03_002160]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-03_002170]]
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*** Tool: [[pathwaytools]]
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*** [[Ec-01_000980]]
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*** [[Ec-06_009930]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[6PFRUCTPHOS-RXN]]
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** 3 associated gene(s):
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*** [[Ec-14_003880]]
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*** [[Ec-22_000070]]
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*** [[Ec-12_002540]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[F16ALDOLASE-RXN]]
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** 4 associated gene(s):
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*** [[Ec-10_004980]]
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*** [[Ec-01_008040]]
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*** [[Ec-10_000880]]
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*** [[Ec-14_001680]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[GAPOXNPHOSPHN-RXN]]
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** 4 associated gene(s):
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*** [[Ec-25_003550]]
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*** [[Ec-19_001850]]
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*** [[Ec-19_003020]]
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*** [[Ec-08_000500]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PEPDEPHOS-RXN]]
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** 3 associated gene(s):
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*** [[Ec-26_004170]]
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*** [[Ec-06_006860]]
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*** [[Ec-12_000950]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PHOSGLYPHOS-RXN]]
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** 6 associated gene(s):
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*** [[Ec-12_004530]]
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*** [[Ec-21_005710]]
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*** [[Ec-21_004220]]
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*** [[Ec-08_002400]]
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*** [[Ec-12_004550]]
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*** [[Ec-01_001350]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[TRIOSEPISOMERIZATION-RXN]]
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** 4 associated gene(s):
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*** [[Ec-08_000500]]
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*** [[Ec-24_000360]]
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*** [[Ec-03_002790]]
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*** [[Ec-23_004160]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.9-RXN 1.2.1.9-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.90-RXN 2.7.1.90-RXN]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* ARACYC:
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{{#set: common name=4-alpha-hydroxytetrahydrobiopterin dehydratase}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-1042 PWY-1042]
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{{#set: ec number=EC-4.2.1.96}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: gene associated=Ec-12_001420}}
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{{#set: common name=glycolysis IV (plant cytosol)}}
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{{#set: in pathway=PWY-7158}}
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{{#set: common name=glycolysis 4}}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction found=8}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: total reaction=10}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: completion rate=80.0}}

Latest revision as of 20:15, 21 March 2018

Pathway PWY-1042

  • taxonomic range:
  • common name:
    • glycolysis IV (plant cytosol)
  • Synonym(s):
    • glycolysis 4

Reaction(s) found

8 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-1042&oldid=25575"